RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 RNF126Q9BV68 326 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 SLC5A7Q9GZV3 580 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 TMEM140Q9NV12 185 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 ANXA10Q9UJ72 324 aa6.34□□□□□ -1.39
NUP85-223ENST00000583877 F11RQ9Y624 299 aaKnown RBP6.34□□□□□ -1.39
NUP85-223ENST00000583877 TRAV14DV4A0A0A6YYC5 116 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 TEX50A0A1B0GTY4 177 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 SMIM30A4D0T7 59 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 TMEM235A6NFC5 223 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 K7EIM0 57 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 DNASE2O00115 360 aaPredicted RBP6.33□□□□□ -1.4
NUP85-223ENST00000583877 NUPL2O15504 423 aaKnown RBP6.33□□□□□ -1.4
NUP85-223ENST00000583877 DFFBO76075 338 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 CD5P06127 495 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
NUP85-223ENST00000583877 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 P0DMU3 169 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 FAM231AP0DMU4 169 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 FAM231CP0DMU5 169 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 MIFP14174 115 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 FCGR2CP31995 323 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 FXYD4P59646 89 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 ERVK-16P61578 105 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
NUP85-223ENST00000583877 TMEM41BQ5BJD5 291 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 ZNF773Q6PK81 442 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 Q6ZTC4 211 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 POM121L12Q8N7R1 296 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 OR51H1Q8NH63 302 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 ZNF414Q96IQ9 312 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 MGLLQ99685 303 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 BCL7BQ9BQE9 202 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 PLEKHA2Q9HB19 425 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 NDUFA4L2Q9NRX3 87 aa6.33□□□□□ -1.4
NUP85-223ENST00000583877 IGHV4-28A0A0C4DH34 117 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 M0R2N4 97 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 SSX5O60225 188 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 PFDN1O60925 122 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 SCGNO76038 276 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 AMBPP02760 352 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 FCER2P06734 321 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 DEFB131AP59861 70 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 LGALS9BQ3B8N2 356 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 AADACL3Q5VUY0 350 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 TCF24Q7RTU0 167 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 STHQ8IWL8 128 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 OR13F1Q8NGS4 319 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 GIMAP1Q8WWP7 306 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 BORCS5Q969J3 196 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 LSM10Q969L4 123 aaKnown RBP6.32□□□□□ -1.4
NUP85-223ENST00000583877 DUSP21Q9H596 190 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 COMMD9Q9P000 198 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 BLOC1S6Q9UL45 172 aa6.32□□□□□ -1.4
NUP85-223ENST00000583877 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
NUP85-223ENST00000583877 HERC1Q15751 4861 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 TRAV2A0A0B4J234 112 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 MARCH11A6NNE9 402 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 ZNF705EA8MWA4 302 aaPredicted RBP6.31□□□□□ -1.4
NUP85-223ENST00000583877 ST8SIA3O43173 380 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 SNAPC5O75971 98 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 PPYP01298 95 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 GIG44P09565 113 aaPredicted RBP6.31□□□□□ -1.4
NUP85-223ENST00000583877 PTHLHP12272 177 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 TMBIM6P55061 237 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 GABARAPL2P60520 117 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 LEMD1Q68G75 181 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 MORN3Q6PF18 240 aaPredicted RBP6.31□□□□□ -1.4
NUP85-223ENST00000583877 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 LYSMD2Q8IV50 215 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 CADM3Q8N126 398 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 BEST4Q8NFU0 473 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 TXN2Q99757 166 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 NXF2Q9GZY0 626 aaKnown RBP6.31□□□□□ -1.4
NUP85-223ENST00000583877 MS4A6AQ9H2W1 248 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 VSIRQ9H7M9 311 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 NSG2Q9Y328 171 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 OR51B2Q9Y5P1 312 aa6.31□□□□□ -1.4
NUP85-223ENST00000583877 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 GNG7O60262 68 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 SPP1P10451 314 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 MFAP4P55083 255 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 HERV-K104P61576 105 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 C22orf42Q6IC83 251 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 ZNF818PQ6ZRF7 136 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 PRSS48Q7RTY5 328 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 TRPT1Q86TN4 253 aaKnown RBP6.3□□□□□ -1.4
NUP85-223ENST00000583877 TPRA1Q86W33 373 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 DUSP18Q8NEJ0 188 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 OR1P1Q8NH06 330 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 RAB2BQ8WUD1 216 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 ST8SIA2Q92186 375 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 SLC25A46Q96AG3 418 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 TMEM56Q96MV1 263 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 GINS3Q9BRX5 216 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 NDUFAF3Q9BU61 184 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
NUP85-223ENST00000583877 DNAH5Q8TE73 4624 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms