RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 USMG5Q96IX5 58 aa10.85□□□□□ -0.67
GGA3-216ENST00000583282 ZC4H2Q9NQZ6 224 aa10.85□□□□□ -0.67
GGA3-216ENST00000583282 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
GGA3-216ENST00000583282 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
GGA3-216ENST00000583282 LSM5Q9Y4Y9 91 aaKnown RBP10.85□□□□□ -0.67
GGA3-216ENST00000583282 INS-IGF2F8WCM5 200 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 I3L521 148 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 CCL24O00175 119 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 SYNGR2O43760 224 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 MED6O75586 246 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 BRI3O95415 125 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 IGHV3-48P01763 117 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 HTR2BP41595 481 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 UBAC2Q8NBM4 344 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 OR11H1Q8NG94 326 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 C2orf50Q96LR7 162 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 CCDC140Q96MF4 163 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 THYN1Q9P016 225 aa10.84□□□□□ -0.67
GGA3-216ENST00000583282 DNHD1Q96M86 4753 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 K7EIM0 57 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 MT-CO2P00403 227 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 MBPP02686 304 aaPredicted RBP10.83□□□□□ -0.68
GGA3-216ENST00000583282 GPR183P32249 361 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 OPRK1P41145 380 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 SUB1P53999 127 aaKnown RBP eCLIP10.83□□□□□ -0.68
GGA3-216ENST00000583282 SLURP1P55000 103 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 LRRC37A5PQ49AS3 106 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 CLEC19AQ6UXS0 136 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 TMEM170AQ8WVE7 144 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 DPF1Q92782 380 aa10.83□□□□□ -0.68
GGA3-216ENST00000583282 LINC01619G3V211 115 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 ZNF616Q08AN1 781 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 BSXQ3C1V8 233 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 Q56UQ5 140 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 SPANXN5Q5MJ07 72 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 OR1N2Q8NGR9 330 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 CXorf58Q96LI9 332 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 CIB3Q96Q77 187 aaPredicted RBP10.82□□□□□ -0.68
GGA3-216ENST00000583282 OR4C12Q96R67 309 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 MED28Q9H204 178 aa10.82□□□□□ -0.68
GGA3-216ENST00000583282 OR2T8A6NH00 312 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 C15orf62A8K5M9 175 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 I3L2K1 104 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 K7EPK0 472 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 CORTO00230 105 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 IFNA4P05014 189 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 OR8U8P0C7N1 319 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 MYCNOSP40205 109 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 H2BFSP57053 126 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 RUNX1Q01196 453 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 ID3Q02535 119 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 RAB32Q13637 225 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 FCN2Q15485 313 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 ACSM6Q6P461 480 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 SCARB1Q8WTV0 552 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 WDR89Q96FK6 387 aaPredicted RBP10.81□□□□□ -0.68
GGA3-216ENST00000583282 C21orf62Q9NYP8 219 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 PSENENQ9NZ42 101 aa10.81□□□□□ -0.68
GGA3-216ENST00000583282 PEF1Q9UBV8 284 aaKnown RBP10.81□□□□□ -0.68
GGA3-216ENST00000583282 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.8□□□□□ -0.68
GGA3-216ENST00000583282 L7N2F9 121 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 BMPR1BO00238 502 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 HSPB1P04792 205 aaKnown RBP10.8□□□□□ -0.68
GGA3-216ENST00000583282 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
GGA3-216ENST00000583282 ARL3P36405 182 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 VAMP2P63027 116 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 FHL3Q13643 280 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 RPEL1Q2QD12 228 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 KLK9Q2XQG4 91 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 LINC00482Q8N8I6 264 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 OR11H7Q8NGC8 314 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 VN1R17PQ8TDU5 208 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
GGA3-216ENST00000583282 KLK9Q9UKQ9 250 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 U3KQ87 197 aa10.8□□□□□ -0.68
GGA3-216ENST00000583282 TRBV7-1A0A0A6YYK4 115 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 IGHV3-35A0A0C4DH35 117 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 RPS10-NUDT3A0A1W2PQS6 291 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 TMEM50AO95807 157 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 CXCL3P19876 107 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 CD33P20138 364 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 PRR31Q5SQ13 230 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 SLC16A13Q7RTY0 426 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 RANGRFQ9HD47 186 aaPredicted RBP10.79□□□□□ -0.68
GGA3-216ENST00000583282 MRPL36Q9P0J6 103 aaKnown RBP10.79□□□□□ -0.68
GGA3-216ENST00000583282 STRAPQ9Y3F4 350 aaKnown RBP10.79□□□□□ -0.68
GGA3-216ENST00000583282 WNK1Q9H4A3 2382 aa10.79□□□□□ -0.68
GGA3-216ENST00000583282 F8W735 103 aaPredicted RBP10.78□□□□□ -0.68
GGA3-216ENST00000583282 TGOLN2O43493 480 aa10.78□□□□□ -0.68
GGA3-216ENST00000583282 CCNKO75909 580 aa10.78□□□□□ -0.68
GGA3-216ENST00000583282 BCAP31P51572 246 aa10.78□□□□□ -0.68
GGA3-216ENST00000583282 RRAS2P62070 204 aaPredicted RBP10.78□□□□□ -0.68
GGA3-216ENST00000583282 RAB11AP62491 216 aa10.78□□□□□ -0.68
GGA3-216ENST00000583282 RPP30P78346 268 aaKnown RBP10.78□□□□□ -0.68
GGA3-216ENST00000583282 MLANAQ16655 118 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms