RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PINX1Q96BK5 328 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-218ENST00000582955 SDHCQ99643 169 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-218ENST00000582955 SIGLEC8Q9NYZ4 499 aa9.59□□□□□ -0.87
SMARCE1-218ENST00000582955 TGP01266 2768 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 CENPXA8MT69 81 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 LGALS9O00182 355 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 MT-CO2P00403 227 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 SULT1A3P0DMM9 295 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 SULT1A4P0DMN0 295 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 SUB1P53999 127 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 SPCS3P61009 180 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 CD69Q07108 199 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 LYZL2Q7Z4W2 148 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 CENPSQ8N2Z9 138 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 BSCL2Q96G97 398 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
SMARCE1-218ENST00000582955 CEBPZOSA8MTT3 80 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 I3L2K1 104 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 IGHV3-48P01763 117 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 RNASE2P10153 161 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 FOLR2P14207 255 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 EDN2P20800 178 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 MFAP4P55083 255 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 CNPY1Q3B7I2 92 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 LCN12Q6JVE5 192 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 SPSB3Q6PJ21 355 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 OR52E5Q8NH55 327 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 CACNG8Q8WXS5 425 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 C7orf50Q9BRJ6 194 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 PALMDQ9NP74 551 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 HEYLQ9NQ87 328 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 GAR1Q9NY12 217 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 LSM4Q9Y4Z0 139 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 SORL1Q92673 2214 aa9.57□□□□□ -0.88
SMARCE1-218ENST00000582955 PIGBOS1A0A0B4J2F0 54 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 A6NHS1 94 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 A8MWP6 167 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 NDUFB6O95139 128 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 SFT2D2O95562 160 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 PPP1R1AQ13522 171 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 SMCO1Q147U7 214 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 AARDQ4LEZ3 155 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 NMSQ5H8A3 153 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 UNQ9165/PRO28630Q6UXU0 137 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 ZNF436Q9C0F3 470 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 UFC1Q9Y3C8 167 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 SMAD5-AS1Q9Y6J3 95 aa9.56□□□□□ -0.88
SMARCE1-218ENST00000582955 DUXBA0A1W2PPF3 345 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 TMEM213A2RRL7 107 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 IZUMO1RA6ND01 250 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 CORTO00230 105 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 NUPL2O15504 423 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 GNG7O60262 68 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 CBLN1P23435 193 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 ANKRD55Q3KP44 614 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 CD300EQ496F6 205 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 TM4SF20Q53R12 229 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 UXS1Q8NBZ7 420 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 OR2K2Q8NGT1 345 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 OR1S1Q8NH92 325 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 TXN2Q99757 166 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 B9D2Q9BPU9 175 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 C20orf24Q9BUV8 137 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 FLVCR2Q9UPI3 526 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 SELENOKQ9Y6D0 94 aa9.55□□□□□ -0.88
SMARCE1-218ENST00000582955 A0A1B0GU03 582 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 NDUFA4O00483 81 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 BTCP35070 178 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 ADMP35318 185 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 OPRK1P41145 380 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 HTR2BP41595 481 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 UBE2MP61081 183 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 RELQ04864 619 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 TNFRSF9Q07011 255 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 DEFB114Q30KQ6 69 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 GTSCR1Q86UQ5 136 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 DUSP18Q8NEJ0 188 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 SLC24A4Q8NFF2 622 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 HIPK2Q9H2X6 1198 aa9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 TECRQ9NZ01 308 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-218ENST00000582955 IGHV3OR16-8A0A075B7F1 116 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 C9orf170A2RU37 121 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 YIF1AO95070 293 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 CTSGP08311 255 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 HOXB5P09067 269 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 NPBWR1P48145 328 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 ELLP55199 621 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 GUCA2BQ16661 112 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 BSXQ3C1V8 233 aa9.53□□□□□ -0.88
SMARCE1-218ENST00000582955 PVRIGQ6DKI7 326 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms