RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ZNF355PQ9NSJ1 428 aa7.43□□□□□ -1.22
RFFL-210ENST00000582308 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
RFFL-210ENST00000582308 WNK1Q9H4A3 2382 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 STAB1Q9NY15 2570 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 PMS2P5A8MQ11 134 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 H3BUA1 57 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 TRGV3P03979 118 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
RFFL-210ENST00000582308 ELANEP08246 267 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 METTL15P1P0C7V9 234 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 PET100P0DJ07 73 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 SLC25A4P12235 298 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 RAB9AP51151 201 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 RHOGP84095 191 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 FGL1Q08830 312 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 ARL16Q0P5N6 197 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 AWAT1Q58HT5 328 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 HIST2H2BDQ6DRA6 164 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 HAPLN4Q86UW8 402 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 TCTE3Q8IZS6 198 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 OR11H4Q8NGC9 324 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 OR1L6Q8NGR2 347 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 THAP6Q8TBB0 222 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 MISP3Q96FF7 219 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 LYRM2Q9NU23 88 aaPredicted RBP7.42□□□□□ -1.22
RFFL-210ENST00000582308 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
RFFL-210ENST00000582308 PAIP2BQ9ULR5 123 aaKnown RBP7.42□□□□□ -1.22
RFFL-210ENST00000582308 IGHV3-21A0A0B4J1V1 117 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 PRSS46E5RG02 174 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 I3L2K1 104 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 K7EIM0 57 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 CST7O76096 145 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 IFNA4P05014 189 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 OR8U8P0C7N1 319 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 CD28P10747 220 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 HIST1H1BP16401 226 aaKnown RBP7.41□□□□□ -1.22
RFFL-210ENST00000582308 P2RY1P47900 373 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 CAV2P51636 162 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 TPPP2P59282 170 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 RAB11AP62491 216 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 RPP30P78346 268 aaKnown RBP7.41□□□□□ -1.22
RFFL-210ENST00000582308 MLANAQ16655 118 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 TMEM65Q6PI78 240 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 ETV3LQ6ZN32 361 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 NOXA1Q86UR1 476 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 COMMD1Q8N668 190 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 TMEM252Q8N6L7 170 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 NECAP1Q8NC96 275 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 RNASEH2CQ8TDP1 164 aaKnown RBP7.41□□□□□ -1.22
RFFL-210ENST00000582308 DCUN1D4Q92564 292 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 BSCL2Q96G97 398 aaPredicted RBP7.41□□□□□ -1.22
RFFL-210ENST00000582308 FNDC4Q9H6D8 234 aaPredicted RBP7.41□□□□□ -1.22
RFFL-210ENST00000582308 SLA2Q9H6Q3 261 aa7.41□□□□□ -1.22
RFFL-210ENST00000582308 FXYD6-FXYD2A0A087WZ82 144 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 MFSD2BA6NFX1 497 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 FAM223BA6NKX1 122 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 CYB5BO43169 146 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 MT-CO2P00403 227 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 IGHV3-48P01763 117 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 NHLH2Q02577 135 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 C15orf32Q32M92 178 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 OR8G2PQ6IF36 304 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 ZNF546Q86UE3 836 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 FAM223AQ8IWN6 122 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 ZNF491Q8N8L2 437 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 C11orf44Q8N8P7 122 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 WFDC12Q8WWY7 111 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 TMEM158Q8WZ71 300 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 PINX1Q96BK5 328 aaKnown RBP7.4□□□□□ -1.22
RFFL-210ENST00000582308 MRPL36Q9P0J6 103 aaKnown RBP7.4□□□□□ -1.22
RFFL-210ENST00000582308 S4R3C0 116 aa7.4□□□□□ -1.22
RFFL-210ENST00000582308 TCRBV4S1A1TA0A5B7 111 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 CORTO00230 105 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 C1QBP02746 253 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 RPL12P30050 165 aaKnown RBP7.39□□□□□ -1.23
RFFL-210ENST00000582308 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
RFFL-210ENST00000582308 OPRK1P41145 380 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 SULT1A1P50225 295 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 EWSR1Q01844 656 aaKnown RBP eCLIP7.39□□□□□ -1.23
RFFL-210ENST00000582308 ATP5G2Q06055 141 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 CD69Q07108 199 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 EXOSC2Q13868 293 aaKnown RBP7.39□□□□□ -1.23
RFFL-210ENST00000582308 C18orf65Q6ZTR6 163 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 TMEM217Q8N7C4 229 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 OR4X2Q8NGF9 303 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 SCARB1Q8WTV0 552 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 USMG5Q96IX5 58 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 CITED2Q99967 270 aaPredicted RBP7.39□□□□□ -1.23
RFFL-210ENST00000582308 SLC25A31Q9H0C2 315 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 GNB4Q9HAV0 340 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 THYN1Q9P016 225 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 TNFSF18Q9UNG2 199 aa7.39□□□□□ -1.23
RFFL-210ENST00000582308 A0A0G2JLM5 398 aa7.38□□□□□ -1.23
RFFL-210ENST00000582308 RNF222A6NCQ9 220 aa7.38□□□□□ -1.23
RFFL-210ENST00000582308 HMSDA8MTL9 139 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms