RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 RAB3DO95716 219 aa16.64■□□□□ 0.25
CASC3-207ENST00000581849 UCP1P25874 307 aa16.64■□□□□ 0.25
CASC3-207ENST00000581849 STEAP1BQ6NZ63 245 aa16.64■□□□□ 0.25
CASC3-207ENST00000581849 ZNF414Q96IQ9 312 aa16.64■□□□□ 0.25
CASC3-207ENST00000581849 MIXL1Q9H2W2 232 aa16.64■□□□□ 0.25
CASC3-207ENST00000581849 LYSTQ99698 3801 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 CORTO00230 105 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 CTSDP07339 412 aaPredicted RBP16.63■□□□□ 0.25
CASC3-207ENST00000581849 PPP5CP53041 499 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 APOC4P55056 127 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 MEF2DQ14814 521 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 PVRIGQ6DKI7 326 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 SLC35G3Q8N808 338 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 OR4D10Q8NGI6 311 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 BCL7BQ9BQE9 202 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 TP53TG1Q9Y2A0 90 aa16.63■□□□□ 0.25
CASC3-207ENST00000581849 A0A0B4J293 547 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 IGHV7-4-1A0A0J9YVY3 117 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 UBE2CO00762 179 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 RGS5O15539 181 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 SNCAP37840 140 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 SURF2Q15527 256 aaPredicted RBP16.62■□□□□ 0.25
CASC3-207ENST00000581849 OR13C8Q8NGS7 320 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 SMIM4Q8WVI0 70 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 OVOL2Q9BRP0 275 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 PDCD10Q9BUL8 212 aa16.62■□□□□ 0.25
CASC3-207ENST00000581849 KIR2DL5BA0A0G2JN68 375 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 KIR2DL5BA0A0G2JPC4 375 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 CHEK1O14757 476 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 ST8SIA3O43173 380 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 GNG7O60262 68 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 CD5P06127 495 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 NPBWR1P48145 328 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 CMC4P56277 68 aaPredicted RBP16.61■□□□□ 0.25
CASC3-207ENST00000581849 IZUMO4Q1ZYL8 232 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 TRIM16LQ309B1 348 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 ODF3L2Q3SX64 289 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 SCGB2B2Q4G0G5 96 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 Q6ZWC4 215 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 WFDC3Q8IUB2 231 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 FAM219AQ8IW50 185 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 KIR2DL5AQ8N109 375 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 TMEM116Q8NCL8 245 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 DUSP18Q8NEJ0 188 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 KIR2DL5BQ8NHK3 375 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 RAB2BQ8WUD1 216 aa16.61■□□□□ 0.25
CASC3-207ENST00000581849 RRNAD1Q96FB5 475 aaKnown RBP16.61■□□□□ 0.25
CASC3-207ENST00000581849 CTDSPLO15194 276 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 ZNF207O43670 478 aaKnown RBP16.6■□□□□ 0.25
CASC3-207ENST00000581849 IFNA17P01571 189 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 BMI1P35226 326 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 SUB1P53999 127 aaKnown RBP eCLIP16.6■□□□□ 0.25
CASC3-207ENST00000581849 SPCS2Q15005 226 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 AARDQ4LEZ3 155 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 MARCH1Q8TCQ1 289 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 PINX1Q96BK5 328 aaKnown RBP16.6■□□□□ 0.25
CASC3-207ENST00000581849 GINS3Q9BRX5 216 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 RHPN1-AS1Q9BWJ2 59 aa16.6■□□□□ 0.25
CASC3-207ENST00000581849 CCDC59Q9P031 241 aaKnown RBP16.6■□□□□ 0.25
CASC3-207ENST00000581849 IGHV3OR16-8A0A075B7F1 116 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 TRAV14DV4A0A0A6YYC5 116 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 CTDSP2O14595 271 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 YIF1AO95070 293 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 RNF2Q99496 336 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 TMEM222Q9H0R3 208 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 UBQLN2Q9UHD9 624 aa16.59■□□□□ 0.25
CASC3-207ENST00000581849 C14orf166Q9Y224 244 aaKnown RBP16.59■□□□□ 0.25
CASC3-207ENST00000581849 DNAH1Q9P2D7 4330 aa16.58■□□□□ 0.25
CASC3-207ENST00000581849 DISC1C4P0D8 188 aa16.58■□□□□ 0.24
CASC3-207ENST00000581849 CDS2O95674 445 aa16.58■□□□□ 0.24
CASC3-207ENST00000581849 TMBIM6P55061 237 aa16.58■□□□□ 0.24
CASC3-207ENST00000581849 SP6Q3SY56 376 aa16.58■□□□□ 0.24
CASC3-207ENST00000581849 RNASE2P10153 161 aaKnown RBP16.57■□□□□ 0.24
CASC3-207ENST00000581849 RPL5P46777 297 aaKnown RBP16.57■□□□□ 0.24
CASC3-207ENST00000581849 HOXA1P49639 335 aaPredicted RBP16.57■□□□□ 0.24
CASC3-207ENST00000581849 SPINK9Q5DT21 86 aa16.57■□□□□ 0.24
CASC3-207ENST00000581849 FAM90A2PQ658T7 463 aa16.57■□□□□ 0.24
CASC3-207ENST00000581849 ZNF600Q6ZNG1 722 aa16.57■□□□□ 0.24
CASC3-207ENST00000581849 CLVS1Q8IUQ0 354 aaPredicted RBP16.57■□□□□ 0.24
CASC3-207ENST00000581849 OR52E5Q8NH55 327 aa16.57■□□□□ 0.24
CASC3-207ENST00000581849 RNASE11Q8TAA1 199 aaKnown RBP16.57■□□□□ 0.24
CASC3-207ENST00000581849 GALNT14Q96FL9 552 aa16.57■□□□□ 0.24
CASC3-207ENST00000581849 C6orf62Q9GZU0 229 aaPredicted RBP16.57■□□□□ 0.24
CASC3-207ENST00000581849 ENY2Q9NPA8 101 aa16.57■□□□□ 0.24
CASC3-207ENST00000581849 JTBO76095 146 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 IGHV3-48P01763 117 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 AKAIN1P0CW23 69 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 DHODHQ02127 395 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 BSXQ3C1V8 233 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 TOMM20LQ6UXN7 152 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 DYNC2LI1Q8TCX1 351 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 RBPMSQ93062 196 aaKnown RBP16.56■□□□□ 0.24
CASC3-207ENST00000581849 DIRAS2Q96HU8 199 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 PRRT1Q99946 306 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 RTBDNQ9BSG5 229 aaPredicted RBP16.56■□□□□ 0.24
CASC3-207ENST00000581849 NAA60Q9H7X0 242 aa16.56■□□□□ 0.24
CASC3-207ENST00000581849 A0A0G2JRQ6 117 aa16.55■□□□□ 0.24
CASC3-207ENST00000581849 SPRY2O43597 315 aa16.55■□□□□ 0.24
CASC3-207ENST00000581849 SCGB2A1O75556 95 aa16.55■□□□□ 0.24
CASC3-207ENST00000581849 OR5AC1P0C628 307 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms