RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 DEFA5Q01523 94 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 PAX8Q06710 450 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 CD69Q07108 199 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 RAB31Q13636 194 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 MIC13Q5XKP0 118 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 LRRC75A-AS1Q8N1F1 130 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 WFDC11Q8NEX6 87 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 NPBQ8NG41 125 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 P2RX4Q99571 388 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 GGTLC1Q9BX51 225 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 SLC25A22Q9H936 323 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
MKS1-211ENST00000581761 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 C2CD3Q4AC94 2353 aa11.69□□□□□ -0.54
MKS1-211ENST00000581761 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 RBFOX3A6NFN3 312 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 NPFFO15130 113 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 CYB5BO43169 146 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 NDUFA3O95167 84 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 SLC25A16P16260 332 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 M6PRP20645 277 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 GPX4P36969 197 aaPredicted RBP11.68□□□□□ -0.54
MKS1-211ENST00000581761 FGF8P55075 233 aaPredicted RBP11.68□□□□□ -0.54
MKS1-211ENST00000581761 HAGHQ16775 308 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 CLEC12BQ2HXU8 276 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 RPP25LQ8N5L8 163 aaKnown RBP11.68□□□□□ -0.54
MKS1-211ENST00000581761 RNASEH2CQ8TDP1 164 aaKnown RBP11.68□□□□□ -0.54
MKS1-211ENST00000581761 ABHD5Q8WTS1 349 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 MALSU1Q96EH3 234 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 C1orf159Q96HA4 380 aa11.68□□□□□ -0.54
MKS1-211ENST00000581761 FCN1O00602 326 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
MKS1-211ENST00000581761 CNIH1O95406 144 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 PPT1P50897 306 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 ZNF506Q5JVG8 444 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 Q5PR19 223 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 SRSF12Q8WXF0 261 aaKnown RBP11.67□□□□□ -0.54
MKS1-211ENST00000581761 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 RARRES2Q99969 163 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 SEC11CQ9BY50 192 aa11.67□□□□□ -0.54
MKS1-211ENST00000581761 CARHSP1Q9Y2V2 147 aaKnown RBP11.67□□□□□ -0.54
MKS1-211ENST00000581761 CENPVL3A0A0U1RRI6 287 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 LOC102723971A0A1B0GUV8 181 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 YIF1AO95070 293 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 IFNA1P01562 189 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 APELAP0DMC3 54 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 AREGP15514 252 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 TMEM11P17152 192 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 BRS3P32247 399 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 SAA4P35542 130 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 CDC34P49427 236 aaPredicted RBP11.66□□□□□ -0.54
MKS1-211ENST00000581761 B2MP61769 119 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
MKS1-211ENST00000581761 EBI3Q14213 229 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 GAMTQ14353 236 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 MLANAQ16655 118 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 Q8N6K4 173 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 SMDT1Q9H4I9 107 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 GNG13Q9P2W3 67 aa11.66□□□□□ -0.54
MKS1-211ENST00000581761 IGHV3OR16-10A0A075B7F0 116 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 HMGB3O15347 200 aaKnown RBP11.65□□□□□ -0.54
MKS1-211ENST00000581761 OR10J1P30954 320 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
MKS1-211ENST00000581761 RIPPLY3P57055 190 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 ICAM4Q14773 271 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 GUCA2BQ16661 112 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 GCSAMLQ5JQS6 135 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 SVBPQ8N300 66 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 STPG3Q8N7X2 389 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 OR2T6Q8NHC8 308 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 RAB24Q969Q5 203 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 ACY3Q96HD9 319 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 AJUBAQ96IF1 538 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 SRSF8Q9BRL6 282 aaKnown RBP11.65□□□□□ -0.54
MKS1-211ENST00000581761 SLC45A2Q9UMX9 530 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 ZANQ9Y493 2812 aa11.65□□□□□ -0.54
MKS1-211ENST00000581761 WNK2Q9Y3S1 2297 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 IGHV1-69DA0A0B4J2H0 117 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 A0A1W2PPV4 95 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 ZFP92A6NM28 416 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 NCBP2LA6PVI3 153 aaKnown RBP11.64□□□□□ -0.55
MKS1-211ENST00000581761 SEC14L6B5MCN3 397 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 IGHV1-69P01742 117 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 MSMBP08118 114 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 FXYD3Q14802 87 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms