RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ZNF701	M0R085	212 aa	Predicted RBP	9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	CTSG	P08311	255 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	TNFSF8	P32971	234 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	HAGH	Q16775	308 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	TM4SF20	Q53R12	229 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708		Q56UQ5	140 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	PVRIG	Q6DKI7	326 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	LAMTOR1	Q6IAA8	161 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	TMEM61	Q8N0U2	210 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	SLC35G3	Q8N808	338 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	OR4C16	Q8NGL9	310 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	OR52E5	Q8NH55	327 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	RBPMS	Q93062	196 aa	Known RBP	9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	SPAG8	Q99932	426 aa	Predicted RBP	9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	RTBDN	Q9BSG5	229 aa	Predicted RBP	9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	NAA60	Q9H7X0	242 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	GPR132	Q9UNW8	380 aa		9.47	□□□□□ -0.89
CDK5RAP3-222	ENST00000581708	OR11H12	B2RN74	326 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IFNA17	P01571	189 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CD7	P09564	240 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ADM	P35318	185 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	FAU	P35544	74 aa	Known RBP	9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	NPBWR1	P48145	328 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	AP3S2	P59780	193 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	OR52B4	Q8NGK2	314 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	MUC7	Q8TAX7	377 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	GLYATL2	Q8WU03	294 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CACNG8	Q8WXS5	425 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IL22RA2	Q969J5	263 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	MISP3	Q96FF7	219 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	WDR89	Q96FK6	387 aa	Predicted RBP	9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	FAM110A	Q9BQ89	295 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CHRDL1	Q9BU40	450 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	KCNIP3	Q9Y2W7	256 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CEPT1	Q9Y6K0	416 aa		9.46	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CRYM-AS1	A6NIL9	109 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TSPAN4	O14817	238 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ST8SIA3	O43173	380 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SCGB2A1	O75556	95 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	MT-CO2	P00403	227 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CD5	P06127	495 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	OR5AC1	P0C628	307 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	BMI1	P35226	326 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SPCS3	P61009	180 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SP6	Q3SY56	376 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	BTNL8	Q6UX41	500 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	UBAC2	Q8NBM4	344 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	DUSP18	Q8NEJ0	188 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RNASE11	Q8TAA1	199 aa	Known RBP	9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	GALNT14	Q96FL9	552 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	OR10C1	Q96KK4	312 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ENY2	Q9NPA8	101 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM56-RWDD3	S4R434	201 aa		9.45	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	HUWE1	Q7Z6Z7	4374 aa	Known RBP	9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	GNG7	O60262	68 aa		9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	EDN2	P20800	178 aa		9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	BSX	Q3C1V8	233 aa		9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	FAAP20	Q6NZ36	180 aa		9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	OR51S1	Q8NGJ8	323 aa		9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SMPX	Q9UHP9	88 aa		9.44	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IGHV3-21	A0A0B4J1V1	117 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IGHV3-35	A0A0C4DH35	117 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	S100A5	P33763	92 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	HTR2B	P41595	481 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	HOXA1	P49639	335 aa	Predicted RBP	9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CMC4	P56277	68 aa	Predicted RBP	9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SRPX	P78539	464 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IZUMO4	Q1ZYL8	232 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	NOXA1	Q86UR1	476 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SELENOH	Q8IZQ5	122 aa	Known RBP	9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	DEFB125	Q8N687	156 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	GINS3	Q9BRX5	216 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	C20orf24	Q9BUV8	137 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	HIPK2	Q9H2X6	1198 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SRD5A3	Q9H8P0	318 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	EDA2R	Q9HAV5	297 aa		9.43	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	KMT2C	Q8NEZ4	4911 aa	Known RBP	9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	OR4C46	A6NHA9	309 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SCAF4	O95104	1147 aa	Known RBP	9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RNASE2	P10153	161 aa	Known RBP	9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ANXA3	P12429	323 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	LYL1	P12980	280 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ETV6	P41212	452 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM268	Q5VZI3	342 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ZNF600	Q6ZNG1	722 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	LHFPL5	Q8TAF8	219 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RNASEH2C	Q8TDP1	164 aa	Known RBP	9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	PINX1	Q96BK5	328 aa	Known RBP	9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	MCUB	Q9NWR8	336 aa		9.42	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TRAV30	A0A087WSZ9	112 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TRAV14DV4	A0A0A6YYC5	116 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708		A0A0B4J2A0	478 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708		A0A0G2JRQ6	117 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IGHV7-4-1	A0A0J9YVY3	117 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RPS10-NUDT3	A0A1W2PQS6	291 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RBMY1B	A6NDE4	496 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RBMY1E	A6NEQ0	496 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CCDC160	A6NGH7	325 aa		9.41	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms