RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 IGKV1D-39P04432 117 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 IFNA4P05014 189 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 MED14OSP0DP75 135 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 HLA-DMAP28067 261 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 UCP3P55916 312 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 ERHP84090 104 aaKnown RBP7.76□□□□□ -1.17
RFFL-209ENST00000581265 PRCDQ00LT1 54 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 TOMM20LQ6UXN7 152 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 TCF24Q7RTU0 167 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 TBC1D26Q86UD7 250 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 LILRB2Q8N423 598 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 GBGT1Q8N5D6 347 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 GPX8Q8TED1 209 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 GINS3Q9BRX5 216 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 VSIRQ9H7M9 311 aa7.76□□□□□ -1.17
RFFL-209ENST00000581265 IGKV3-7A0A075B6H7 116 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 IGHV3OR16-13A0A075B7E8 117 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 IGHV3-74A0A0B4J1X5 117 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 TRAV2A0A0B4J234 112 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 TGFBR1P36897 503 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 NPBWR1P48145 328 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 TCTAP57738 103 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 NANOS2P60321 138 aaKnown RBP7.75□□□□□ -1.17
RFFL-209ENST00000581265 TSPAN5P62079 268 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 RBMS2Q15434 407 aaKnown RBP7.75□□□□□ -1.17
RFFL-209ENST00000581265 KCTD21Q4G0X4 260 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 PVRIGQ6DKI7 326 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 DUSP18Q8NEJ0 188 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 SCPEP1Q9HB40 452 aa7.75□□□□□ -1.17
RFFL-209ENST00000581265 HECTD4Q9Y4D8 3996 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 SMIM31A0A1B0GVY4 71 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 INS-IGF2F8WCM5 200 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 TMEM50AO95807 157 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 APOHP02749 345 aaPredicted RBP7.74□□□□□ -1.17
RFFL-209ENST00000581265 TMEM187Q14656 261 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 ZNF600Q6ZNG1 722 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 ST8SIA2Q92186 375 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 MRGPRFQ96AM1 343 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 PINX1Q96BK5 328 aaKnown RBP7.74□□□□□ -1.17
RFFL-209ENST00000581265 YIPF6Q96EC8 236 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 MS4A6AQ9H2W1 248 aa7.74□□□□□ -1.17
RFFL-209ENST00000581265 A0A0B4J293 547 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
RFFL-209ENST00000581265 ST8SIA3O43173 380 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 CA1P00915 261 aaPredicted RBP7.73□□□□□ -1.17
RFFL-209ENST00000581265 APOA1P02647 267 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 EIF4EP06730 217 aaKnown RBP7.73□□□□□ -1.17
RFFL-209ENST00000581265 SNCAP37840 140 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 DEFB131AP59861 70 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 C2CD4CQ8TF44 421 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 HRH4Q9H3N8 390 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 FBXL17Q9UF56 701 aa7.73□□□□□ -1.17
RFFL-209ENST00000581265 PUS1Q9Y606 427 aaKnown RBP eCLIP7.73□□□□□ -1.17
RFFL-209ENST00000581265 A0A1B0GU03 582 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 DEFB4AO15263 64 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 IGKV1-5P01602 117 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 GIG44P09565 113 aaPredicted RBP7.72□□□□□ -1.17
RFFL-209ENST00000581265 P0C879 139 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 NPPCP23582 126 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 RCVRNP35243 200 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 RND3P61587 244 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 LSM3P62310 102 aaKnown RBP7.72□□□□□ -1.17
RFFL-209ENST00000581265 RPL11P62913 178 aaKnown RBP7.72□□□□□ -1.17
RFFL-209ENST00000581265 PRR20EP86478 221 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 PRR20CP86479 221 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 PRR20DP86480 221 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 PRR20BP86481 221 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 PRR20AP86496 221 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 IZUMO4Q1ZYL8 232 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 LEMD1Q68G75 181 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 FAM24BQ8N5W8 94 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 ZNF486Q96H40 463 aaPredicted RBP7.72□□□□□ -1.17
RFFL-209ENST00000581265 TMEM231Q9H6L2 316 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 PLA2G2EQ9NZK7 142 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 COMMD3Q9UBI1 195 aa7.72□□□□□ -1.17
RFFL-209ENST00000581265 IGHV3-66A0A0C4DH42 116 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 A0A1W2PS18 150 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 C11orf94C9JXX5 98 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 CORTO00230 105 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 CRYBB3P26998 211 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 RPL5P46777 297 aaKnown RBP7.71□□□□□ -1.18
RFFL-209ENST00000581265 SUB1P53999 127 aaKnown RBP eCLIP7.71□□□□□ -1.18
RFFL-209ENST00000581265 TMEM41BQ5BJD5 291 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 SPINK9Q5DT21 86 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 SNX29P2Q8IUI4 249 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 STHQ8IWL8 128 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 Q8NAQ8 132 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 GRAMD2BQ96HH9 432 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 APLNQ9ULZ1 77 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 DNAH10Q8IVF4 4471 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 AGRNO00468 2067 aa7.71□□□□□ -1.18
RFFL-209ENST00000581265 A0A087WXM4 84 aa7.7□□□□□ -1.18
RFFL-209ENST00000581265 K7EQG2 157 aa7.7□□□□□ -1.18
RFFL-209ENST00000581265 M0QYG6 137 aa7.7□□□□□ -1.18
RFFL-209ENST00000581265 CLN5O75503 358 aa7.7□□□□□ -1.18
RFFL-209ENST00000581265 ATG12O94817 140 aa7.7□□□□□ -1.18
RFFL-209ENST00000581265 IFNA17P01571 189 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms