RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CCDC115Q96NT0 180 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 GPER1Q99527 375 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 TMEM222Q9H0R3 208 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 DEFB127Q9H1M4 99 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 TPT1P8Q9HAU6 139 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 FAM60AQ9NP50 221 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 ENPP4Q9Y6X5 453 aa2.77□□□□□ -1.97
NF1-220ENST00000581113 UBR5O95071 2799 aaPredicted RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 ZFC3H1O60293 1989 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 A0A087WX48 190 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 TRAV8-3A0A0A6YYJ7 113 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 IGHV1-69DA0A0B4J2H0 117 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 TRAPPC13A5PLN9 417 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 G3V2T6 193 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 SLC17A3O00476 420 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 CCDC22O60826 627 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 SERPINB7O75635 380 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 KLF7O75840 302 aaPredicted RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 IGF2P01344 180 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 HBZP02008 142 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 FABP3P05413 133 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 IFI30P13284 250 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 RPL7P18124 248 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 RPS3P23396 243 aaKnown RBP eCLIP2.76□□□□□ -1.97
NF1-220ENST00000581113 PRTN3P24158 256 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 ERP29P30040 261 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 PEBP1P30086 187 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 RPL22P35268 128 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 POLR2IP36954 125 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 PSMB2P49721 201 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 HLA-DRB3P79483 266 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 DCDP81605 110 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 TMEM267Q0VDI3 215 aaPredicted RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 QPRTQ15274 297 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 DEFB110Q30KQ9 67 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 PLPPR5Q32ZL2 321 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 Q499Y3 187 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 AKR1C8PQ5T2L2 129 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 FBXW12Q6X9E4 464 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 ACP7Q6ZNF0 438 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 C3orf62Q6ZUJ4 267 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 TCF24Q7RTU0 167 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 ZNF429Q86V71 674 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 FDCSPQ8NFU4 85 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 RXFP4Q8TDU9 374 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 GHSRQ92847 366 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 PTX4Q96A99 478 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 APOBEC3DQ96AK3 386 aaPredicted RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 BORCS7Q96B45 105 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 NEURL3Q96EH8 262 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 IP6K3Q96PC2 410 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 NRIP2Q9BQI9 281 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 TMEM243Q9BU79 118 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 GGACTQ9BVM4 153 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 CCL28Q9NRJ3 127 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 RBM7Q9Y580 266 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 RELNP78509 3460 aa2.76□□□□□ -1.97
NF1-220ENST00000581113 SPENQ96T58 3664 aaKnown RBP2.76□□□□□ -1.97
NF1-220ENST00000581113 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 MAST4O15021 2626 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 LOC389332A0A1B0GUA5 103 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 A0A1B0GX78 115 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 MYL12BO14950 172 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 PFDN1O60925 122 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 SULT1C4O75897 302 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 ZNF25P17030 456 aaPredicted RBP2.75□□□□□ -1.97
NF1-220ENST00000581113 GPX2P18283 190 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 RAB3BP20337 219 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 PHBP35232 272 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 SERPINB10P48595 397 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 EMP1P54849 157 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 NCALDP61601 193 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 TBPL1P62380 186 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 CRADDP78560 199 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 NEDD8Q15843 81 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 GUCA2BQ16661 112 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 ATP6AP1LQ52LC2 224 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 EXOC3-AS1Q8N2X6 119 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 DEFB125Q8N687 156 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 LY6G5BQ8NDX9 201 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 OR8B12Q8NGG6 310 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 OR4D11Q8NGI4 311 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 STARD4Q96DR4 205 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 OR4K3Q96R72 315 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 TMEM147Q9BVK8 224 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 COPZ2Q9P299 210 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 DHCR7Q9UBM7 475 aaKnown RBP2.75□□□□□ -1.97
NF1-220ENST00000581113 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
NF1-220ENST00000581113 PTPN13Q12923 2485 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 LRRK2Q5S007 2527 aa2.75□□□□□ -1.97
NF1-220ENST00000581113 ZNF106Q9H2Y7 1883 aaKnown RBP2.75□□□□□ -1.97
NF1-220ENST00000581113 TMED7-TICAM2A0A0A6YYA0 188 aa2.74□□□□□ -1.97
NF1-220ENST00000581113 TRAV26-2A0A0B4J265 109 aa2.74□□□□□ -1.97
NF1-220ENST00000581113 SS18L1O75177 396 aaPredicted RBP2.74□□□□□ -1.97
NF1-220ENST00000581113 IGHMP01871 453 aa2.74□□□□□ -1.97
NF1-220ENST00000581113 CSN2P05814 226 aa2.74□□□□□ -1.97
NF1-220ENST00000581113 CMPK1P30085 196 aa2.74□□□□□ -1.97
NF1-220ENST00000581113 LHX2P50458 406 aa2.74□□□□□ -1.97
NF1-220ENST00000581113 ELF3P78545 371 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms