RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 RNF2Q99496 336 aa10.07□□□□□ -0.8
PGAP3-207ENST00000580898 NXF2Q9GZY0 626 aaKnown RBP10.07□□□□□ -0.8
PGAP3-207ENST00000580898 MAP6D1Q9H9H5 199 aa10.07□□□□□ -0.8
PGAP3-207ENST00000580898 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 FAM25AB3EWG3 89 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 FAM25CB3EWG5 89 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 FAM25GB3EWG6 89 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 LY6G6CO95867 125 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 SUB1P53999 127 aaKnown RBP eCLIP10.06□□□□□ -0.8
PGAP3-207ENST00000580898 RND3P61587 244 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
PGAP3-207ENST00000580898 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 C15orf40Q8WUR7 153 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 GATAD1Q8WUU5 269 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 FUNDC2Q9BWH2 189 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 TMEM231Q9H6L2 316 aa10.06□□□□□ -0.8
PGAP3-207ENST00000580898 MPTX1A8MV57 137 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 HPGDSO60760 199 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 IFNA17P01571 189 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 ELK1P19419 428 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 TBPP20226 339 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 TFPI2P48307 235 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 VBP1P61758 197 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 NCS1P62166 190 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 ARRDC1Q8N5I2 433 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 CSTL1Q9H114 145 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 ENY2Q9NPA8 101 aa10.05□□□□□ -0.8
PGAP3-207ENST00000580898 IGKV3-7A0A075B6H7 116 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 M0QYG6 137 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 DNASE2O00115 360 aaPredicted RBP10.04□□□□□ -0.8
PGAP3-207ENST00000580898 ST8SIA3O43173 380 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 B3GALNT1O75752 331 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 PIGPP57054 158 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 ZNF600Q6ZNG1 722 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 TCF24Q7RTU0 167 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 APRG1Q8IVJ8 170 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
PGAP3-207ENST00000580898 ZFAND1Q8TCF1 268 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
PGAP3-207ENST00000580898 MFFQ9GZY8 342 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 COPZ2Q9P299 210 aa10.04□□□□□ -0.8
PGAP3-207ENST00000580898 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 C3orf85A0A1B0GTC6 90 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 A0A1W2PS18 150 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 INS-IGF2F8WCM5 200 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 DFFBO76075 338 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 HOXA1P49639 335 aaPredicted RBP10.03□□□□□ -0.8
PGAP3-207ENST00000580898 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
PGAP3-207ENST00000580898 RARRES2Q99969 163 aa10.03□□□□□ -0.8
PGAP3-207ENST00000580898 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
PGAP3-207ENST00000580898 IGHV3-48P01763 117 aa10.02□□□□□ -0.81
PGAP3-207ENST00000580898 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
PGAP3-207ENST00000580898 FAM90A2PQ658T7 463 aa10.02□□□□□ -0.81
PGAP3-207ENST00000580898 TOMM20LQ6UXN7 152 aa10.02□□□□□ -0.81
PGAP3-207ENST00000580898 GBGT1Q8N5D6 347 aa10.02□□□□□ -0.81
PGAP3-207ENST00000580898 KLK11Q9UBX7 282 aa10.02□□□□□ -0.81
PGAP3-207ENST00000580898 PUS1Q9Y606 427 aaKnown RBP eCLIP10.02□□□□□ -0.81
PGAP3-207ENST00000580898 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
PGAP3-207ENST00000580898 IGHV3OR16-13A0A075B7E8 117 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 IGHV3-74A0A0B4J1X5 117 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 CD3DP04234 171 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 ZNF182P17025 639 aaPredicted RBP10.01□□□□□ -0.81
PGAP3-207ENST00000580898 NPPCP23582 126 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 OPRK1P41145 380 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 PPP5CP53041 499 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 TAS2R19P59542 299 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 SPINK9Q5DT21 86 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 RNASE12Q5GAN4 147 aaKnown RBP10.01□□□□□ -0.81
PGAP3-207ENST00000580898 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 PHLDA1Q8WV24 401 aaPredicted RBP10.01□□□□□ -0.81
PGAP3-207ENST00000580898 METTL26Q96S19 204 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 TP53RKQ96S44 253 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
PGAP3-207ENST00000580898 VSIRQ9H7M9 311 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 EXTL2Q9UBQ6 330 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 MTFP1Q9UDX5 166 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
PGAP3-207ENST00000580898 HYDINQ4G0P3 5121 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 TRAV30A0A087WSZ9 112 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 RPS10-NUDT3A0A1W2PQS6 291 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 TMEM50AO95807 157 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 CA1P00915 261 aaPredicted RBP10□□□□□ -0.81
PGAP3-207ENST00000580898 IGKV1-5P01602 117 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 IFNA4P05014 189 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 PI3P19957 117 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 EIF2B2P49770 351 aaKnown RBP10□□□□□ -0.81
PGAP3-207ENST00000580898 MRPS10P82664 201 aaKnown RBP10□□□□□ -0.81
PGAP3-207ENST00000580898 EWSR1Q01844 656 aaKnown RBP eCLIP10□□□□□ -0.81
PGAP3-207ENST00000580898 TMEM187Q14656 261 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 SCGB2B2Q4G0G5 96 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 FAM219AQ8IW50 185 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 STHQ8IWL8 128 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 TMEM229BQ8NBD8 167 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 OR52I2Q8NH67 350 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 TERB2Q8NHR7 220 aa10□□□□□ -0.81
PGAP3-207ENST00000580898 ST8SIA2Q92186 375 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms