RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 FOLR2P14207 255 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 VAMP1P23763 118 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 SNCAP37840 140 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 TM4SF20Q53R12 229 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 C11orf87Q6NUJ2 197 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 DYNLRB2Q8TF09 96 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 DEDD2Q8WXF8 326 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 IL22RA2Q969J5 263 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 SLC25A21Q9BQT8 299 aaPredicted RBP10.06□□□□□ -0.8
NUP85-215ENST00000580879 SIGLEC8Q9NYZ4 499 aa10.06□□□□□ -0.8
NUP85-215ENST00000580879 IGHV3OR16-8A0A075B7F1 116 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 A0A0B4J2A0 478 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 TMEM213A2RRL7 107 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 LGALS9O00182 355 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 RNASE2P10153 161 aaKnown RBP10.05□□□□□ -0.8
NUP85-215ENST00000580879 ADMP35318 185 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 SPCS3P61009 180 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 CD69Q07108 199 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 PPP1R1AQ13522 171 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 DCTN2Q13561 401 aaKnown RBP10.05□□□□□ -0.8
NUP85-215ENST00000580879 CNPY1Q3B7I2 92 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
NUP85-215ENST00000580879 AARDQ4LEZ3 155 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 TMEM128Q5BJH2 165 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 LGI3Q8N145 548 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 CENPSQ8N2Z9 138 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 BSCL2Q96G97 398 aaPredicted RBP10.05□□□□□ -0.8
NUP85-215ENST00000580879 SHPKQ9UHJ6 478 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 FLVCR2Q9UPI3 526 aa10.05□□□□□ -0.8
NUP85-215ENST00000580879 NAP1L6A6NFF2 107 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 A6NHS1 94 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 CEBPZOSA8MTT3 80 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 SULT1A3P0DMM9 295 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 SULT1A4P0DMN0 295 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 CBLN1P23435 193 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 BTCP35070 178 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 SRPXP78539 464 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 RBMS2Q15434 407 aaKnown RBP10.04□□□□□ -0.8
NUP85-215ENST00000580879 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 LCN12Q6JVE5 192 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 ASCL2Q99929 193 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 B9D2Q9BPU9 175 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 ZNF436Q9C0F3 470 aaPredicted RBP10.04□□□□□ -0.8
NUP85-215ENST00000580879 HEYLQ9NQ87 328 aaPredicted RBP10.04□□□□□ -0.8
NUP85-215ENST00000580879 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
NUP85-215ENST00000580879 A8MWP6 167 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 ZNF207O43670 478 aaKnown RBP10.03□□□□□ -0.8
NUP85-215ENST00000580879 NDUFB6O95139 128 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 SFT2D2O95562 160 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 CTSGP08311 255 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 SUB1P53999 127 aaKnown RBP eCLIP10.03□□□□□ -0.8
NUP85-215ENST00000580879 MFAP4P55083 255 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 SMCO1Q147U7 214 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 DEFB114Q30KQ6 69 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 SPSB3Q6PJ21 355 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 UXS1Q8NBZ7 420 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 TMEM190Q8WZ59 177 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 C20orf24Q9BUV8 137 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 MLXQ9UH92 298 aa10.03□□□□□ -0.8
NUP85-215ENST00000580879 CENPXA8MT69 81 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 MLANAQ16655 118 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 PVRIGQ6DKI7 326 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 BTNL8Q6UX41 500 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 Q8N1Y9 231 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 WDR89Q96FK6 387 aaPredicted RBP10.02□□□□□ -0.81
NUP85-215ENST00000580879 ZNF414Q96IQ9 312 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 PALMDQ9NP74 551 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 UFC1Q9Y3C8 167 aa10.02□□□□□ -0.81
NUP85-215ENST00000580879 NDUFA4O00483 81 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 PLA2G10O15496 165 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 NUPL2O15504 423 aaKnown RBP10.01□□□□□ -0.81
NUP85-215ENST00000580879 GNG7O60262 68 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 HOXB5P09067 269 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 ANXA7P20073 488 aaKnown RBP10.01□□□□□ -0.81
NUP85-215ENST00000580879 OPRK1P41145 380 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 TNFRSF9Q07011 255 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 GUCA2BQ16661 112 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 DUSP18Q8NEJ0 188 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 OR1S1Q8NH92 325 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 ATP6V0BQ99437 205 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 C7orf50Q9BRJ6 194 aaKnown RBP10.01□□□□□ -0.81
NUP85-215ENST00000580879 RBKSQ9H477 322 aa10.01□□□□□ -0.81
NUP85-215ENST00000580879 FNDC4Q9H6D8 234 aaPredicted RBP10.01□□□□□ -0.81
NUP85-215ENST00000580879 TECRQ9NZ01 308 aaKnown RBP10.01□□□□□ -0.81
NUP85-215ENST00000580879 MRPL36Q9P0J6 103 aaKnown RBP10.01□□□□□ -0.81
NUP85-215ENST00000580879 A0A1B0GU03 582 aa10□□□□□ -0.81
NUP85-215ENST00000580879 C9orf170A2RU37 121 aa10□□□□□ -0.81
NUP85-215ENST00000580879 ZNF785A8K8V0 405 aa10□□□□□ -0.81
NUP85-215ENST00000580879 YIF1AO95070 293 aa10□□□□□ -0.81
NUP85-215ENST00000580879 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
NUP85-215ENST00000580879 IGHV4-30-4P0DP06 118 aa10□□□□□ -0.81
NUP85-215ENST00000580879 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
NUP85-215ENST00000580879 HTR2BP41595 481 aa10□□□□□ -0.81
NUP85-215ENST00000580879 TMEM61Q8N0U2 210 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms