RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CAV2P51636 162 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 TCTEX1D4Q5JR98 221 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 TMEM14EPQ6UXP3 125 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 ZNF114Q8NC26 417 aa12.13□□□□□ -0.47
SS18-216ENST00000580751 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
SS18-216ENST00000580751 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 H3BUA1 57 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 NXPH3O95157 252 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 PF4V1P10720 104 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 IAPPP10997 89 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 S100A11P31949 105 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 SNCAP37840 140 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 SULT1A1P50225 295 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 RAB11AP62491 216 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 HBG1P69891 147 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 HBG2P69892 147 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 LGALSLQ3ZCW2 172 aaPredicted RBP12.12□□□□□ -0.47
SS18-216ENST00000580751 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 SLC24A4Q8NFF2 622 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
SS18-216ENST00000580751 GGACTQ9BVM4 153 aa12.12□□□□□ -0.47
SS18-216ENST00000580751 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
SS18-216ENST00000580751 TET2Q6N021 2002 aaPredicted RBP12.11□□□□□ -0.47
SS18-216ENST00000580751 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 CYB5BO43169 146 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 SOX15O60248 233 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 APELAP0DMC3 54 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 MYOD1P15172 320 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
SS18-216ENST00000580751 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
SS18-216ENST00000580751 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 ZC4H2Q9NQZ6 224 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
SS18-216ENST00000580751 A0A1B0GW64 132 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 E7EUB6 86 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 M0QZ24 198 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 CORTO00230 105 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 BRI3O95415 125 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 IFNA10P01566 189 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 RPLP1P05386 114 aaKnown RBP12.1□□□□□ -0.47
SS18-216ENST00000580751 CRYGCP07315 174 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 CXCL2P19875 107 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 NPY1RP25929 384 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 AP2S1P53680 142 aaPredicted RBP12.1□□□□□ -0.47
SS18-216ENST00000580751 ATP6V1FQ16864 119 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
SS18-216ENST00000580751 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
SS18-216ENST00000580751 KANTRA0A1W2PQU2 76 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 IGSF23A1L1A6 192 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 FAM24AA6NFZ4 105 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 FNDC10F2Z333 226 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 DFFBO76075 338 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 OR13C7P0DN81 318 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 AREGP15514 252 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 RAB9AP51151 201 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 EIF5AP63241 154 aaKnown RBP12.09□□□□□ -0.47
SS18-216ENST00000580751 WT1-ASQ06250 92 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 OR10P1Q8NGE3 313 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 MYOZ3Q8TDC0 251 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 ARPC5LQ9BPX5 153 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
SS18-216ENST00000580751 BCL2L11O43521 198 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 TRGV3P03979 118 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 OR8U8P0C7N1 319 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 RNASE2P10153 161 aaKnown RBP12.08□□□□□ -0.48
SS18-216ENST00000580751 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
SS18-216ENST00000580751 NKX2-5P52952 324 aaPredicted RBP12.08□□□□□ -0.48
SS18-216ENST00000580751 TPPP2P59282 170 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 ZNF266Q14584 549 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 KLK9Q2XQG4 91 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 LCNL1Q6ZST4 164 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 OR10W1Q8NGF6 305 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 OR1S2Q8NGQ3 325 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 OR4C12Q96R67 309 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 KLK15Q9H2R5 256 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 KLK9Q9UKQ9 250 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 VWFP04275 2813 aa12.08□□□□□ -0.48
SS18-216ENST00000580751 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms