RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 LPAR6P43657 344 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 UBE2UQ5VVX9 321 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 C22orf42Q6IC83 251 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 FCAMRQ8WWV6 532 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 TMEM56Q96MV1 263 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 GINS3Q9BRX5 216 aa13.73□□□□□ -0.21
NDEL1-209ENST00000580738 TRDV1A0A1B0GX56 115 aa13.72□□□□□ -0.21
NDEL1-209ENST00000580738 GNG7O60262 68 aa13.72□□□□□ -0.21
NDEL1-209ENST00000580738 SNAPC5O75971 98 aa13.72□□□□□ -0.21
NDEL1-209ENST00000580738 IFNA10P01566 189 aa13.72□□□□□ -0.21
NDEL1-209ENST00000580738 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
NDEL1-209ENST00000580738 TMEM14BQ9NUH8 114 aa13.72□□□□□ -0.21
NDEL1-209ENST00000580738 SCGNO76038 276 aa13.71□□□□□ -0.21
NDEL1-209ENST00000580738 RLN1P04808 185 aa13.71□□□□□ -0.21
NDEL1-209ENST00000580738 F2RP25116 425 aa13.71□□□□□ -0.21
NDEL1-209ENST00000580738 PINX1Q96BK5 328 aaKnown RBP13.71□□□□□ -0.21
NDEL1-209ENST00000580738 ZFAND3Q9H8U3 227 aa13.71□□□□□ -0.21
NDEL1-209ENST00000580738 NDUFB11Q9NX14 153 aa13.71□□□□□ -0.21
NDEL1-209ENST00000580738 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
NDEL1-209ENST00000580738 PUS1Q9Y606 427 aaKnown RBP eCLIP13.71□□□□□ -0.21
NDEL1-209ENST00000580738 NOTOA8MTQ0 251 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 K7EQG2 157 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 PGLYRP1O75594 196 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-209ENST00000580738 CD74P04233 296 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 ZNF688P0C7X2 276 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 ACTL10Q5JWF8 245 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 Q6ZRM9 215 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 MAPKAPK5-AS1Q8N8E1 139 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 LGALS14Q8TCE9 139 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 DAPK2Q9UIK4 370 aa13.7□□□□□ -0.22
NDEL1-209ENST00000580738 TRAV18A0A075B6X5 111 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 A0A1B0GU03 582 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 IFNA21P01568 189 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 IFNA17P01571 189 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 UBE2DNLQ8IWF7 75 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 CADM3Q8N126 398 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 RHBDL2Q9NX52 303 aa13.69□□□□□ -0.22
NDEL1-209ENST00000580738 ZNF367Q7RTV3 350 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 TPRA1Q86W33 373 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 MOB3AQ96BX8 217 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 GRAMD2BQ96HH9 432 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 VCXQ9H320 206 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 HERC1Q15751 4861 aa13.68□□□□□ -0.22
NDEL1-209ENST00000580738 CDK2AP2O75956 126 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 NPY1RP25929 384 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 HERV-K104P61576 105 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 TBCEQ15813 527 aaPredicted RBP13.67□□□□□ -0.22
NDEL1-209ENST00000580738 SOHLH1Q5JUK2 328 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 C1orf134Q5TEV5 83 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 TSPAN14Q8NG11 270 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 OR5AP2Q8NGF4 316 aa13.67□□□□□ -0.22
NDEL1-209ENST00000580738 NPPCP23582 126 aa13.66□□□□□ -0.22
NDEL1-209ENST00000580738 ZNF114Q8NC26 417 aa13.66□□□□□ -0.22
NDEL1-209ENST00000580738 DCANP1Q8TF63 244 aa13.66□□□□□ -0.22
NDEL1-209ENST00000580738 SLC25A38Q96DW6 304 aa13.66□□□□□ -0.22
NDEL1-209ENST00000580738 TMEM231Q9H6L2 316 aa13.66□□□□□ -0.22
NDEL1-209ENST00000580738 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
NDEL1-209ENST00000580738 LRP1BQ9NZR2 4599 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 C16orf90A8MZG2 172 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 NPBWR1P48145 328 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 OR5H6Q8NGV6 325 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 BORCS5Q969J3 196 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 RAB40CQ96S21 281 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
NDEL1-209ENST00000580738 TMEM50AO95807 157 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 P2RY1P47900 373 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 RFX2P48378 723 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 PPP5CP53041 499 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 AQP4P55087 323 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 SFXN4Q6P4A7 337 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 DHRS11Q6UWP2 260 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 TSC22D3Q99576 134 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 AUNIPQ9H7T9 357 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 TXNL4BQ9NX01 149 aaKnown RBP13.64□□□□□ -0.23
NDEL1-209ENST00000580738 EHFQ9NZC4 300 aa13.64□□□□□ -0.23
NDEL1-209ENST00000580738 A0A1W2PS18 150 aa13.63□□□□□ -0.23
NDEL1-209ENST00000580738 CRYBB3P26998 211 aa13.63□□□□□ -0.23
NDEL1-209ENST00000580738 EMP1P54849 157 aa13.63□□□□□ -0.23
NDEL1-209ENST00000580738 PRCDQ00LT1 54 aa13.63□□□□□ -0.23
NDEL1-209ENST00000580738 TNP2Q05952 138 aa13.63□□□□□ -0.23
NDEL1-209ENST00000580738 ZNF2Q9BSG1 426 aaPredicted RBP13.63□□□□□ -0.23
NDEL1-209ENST00000580738 EBAG9O00559 213 aa13.62□□□□□ -0.23
NDEL1-209ENST00000580738 SPINK9Q5DT21 86 aa13.62□□□□□ -0.23
NDEL1-209ENST00000580738 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
NDEL1-209ENST00000580738 OR4A16Q8NH70 328 aa13.62□□□□□ -0.23
NDEL1-209ENST00000580738 SEC22AQ96IW7 307 aa13.62□□□□□ -0.23
NDEL1-209ENST00000580738 SPART-AS1P0CW21 52 aa13.61□□□□□ -0.23
NDEL1-209ENST00000580738 FGF9P31371 208 aaPredicted RBP13.61□□□□□ -0.23
NDEL1-209ENST00000580738 DHRS2Q13268 280 aa13.61□□□□□ -0.23
NDEL1-209ENST00000580738 RNF212Q495C1 297 aa13.61□□□□□ -0.23
NDEL1-209ENST00000580738 CMTM1Q8IZ96 169 aa13.61□□□□□ -0.23
NDEL1-209ENST00000580738 METTL26Q96S19 204 aa13.61□□□□□ -0.23
NDEL1-209ENST00000580738 MRPL36Q9P0J6 103 aaKnown RBP13.61□□□□□ -0.23
NDEL1-209ENST00000580738 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
NDEL1-209ENST00000580738 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms