RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PAIP2BQ9ULR5 123 aaKnown RBP11.16□□□□□ -0.62
SKA2-205ENST00000580541 RCL1Q9Y2P8 373 aaKnown RBP11.16□□□□□ -0.62
SKA2-205ENST00000580541 TSSC4Q9Y5U2 329 aaPredicted RBP11.16□□□□□ -0.62
SKA2-205ENST00000580541 IGLV11-55A0A075B6I3 123 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 SOX15O60248 233 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 SCGB2A1O75556 95 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 NUP62P37198 522 aaPredicted RBP11.15□□□□□ -0.62
SKA2-205ENST00000580541 CDX1P47902 265 aaPredicted RBP11.15□□□□□ -0.62
SKA2-205ENST00000580541 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 CHAC2Q8WUX2 184 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
SKA2-205ENST00000580541 hCG_2014768A0A024R1R8 64 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 TRBV7-1A0A0A6YYK4 115 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 OR2J3O76001 311 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
SKA2-205ENST00000580541 P2RY1P47900 373 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 CAV2P51636 162 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 CD83Q01151 205 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 PVRIGQ6DKI7 326 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 PRSS54Q6PEW0 395 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 CACNG8Q8WXS5 425 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 EEF1AKMT3Q96AZ1 226 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 ZNF747Q9BV97 191 aa11.14□□□□□ -0.63
SKA2-205ENST00000580541 CCNKO75909 580 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 PRH1P02810 166 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
SKA2-205ENST00000580541 SLC25A4P12235 298 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 OPRK1P41145 380 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 KRTAP21-3Q3LHN1 58 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 C11orf87Q6NUJ2 197 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 ETV3LQ6ZN32 361 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 STX12Q86Y82 276 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 ZNF491Q8N8L2 437 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 OR10P1Q8NGE3 313 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 DCUN1D4Q92564 292 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 PINX1Q96BK5 328 aaKnown RBP11.13□□□□□ -0.63
SKA2-205ENST00000580541 TXN2Q99757 166 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 KLK15Q9H2R5 256 aa11.13□□□□□ -0.63
SKA2-205ENST00000580541 LYRM2Q9NU23 88 aaPredicted RBP11.13□□□□□ -0.63
SKA2-205ENST00000580541 CD28P10747 220 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 NPBWR1P48145 328 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 MFAP4P55083 255 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 PAX9P55771 341 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 HBG1P69891 147 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 HBG2P69892 147 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 NDUFA11Q86Y39 141 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
SKA2-205ENST00000580541 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 NUDT19A8MXV4 375 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 H3BP45 60 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 NDUFB8O95169 186 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 MT-CO2P00403 227 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 S100A11P31949 105 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 INO80EQ8NBZ0 244 aaPredicted RBP11.11□□□□□ -0.63
SKA2-205ENST00000580541 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
SKA2-205ENST00000580541 CITED1Q99966 193 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 CITED2Q99967 270 aaPredicted RBP11.11□□□□□ -0.63
SKA2-205ENST00000580541 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 GGACTQ9BVM4 153 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 C21orf62Q9NYP8 219 aa11.11□□□□□ -0.63
SKA2-205ENST00000580541 TRAV30A0A087WSZ9 112 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 I3L2K1 104 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 TMEM50AO95807 157 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 METTL15P1P0C7V9 234 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 LYL1P12980 280 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 SULT1A1P50225 295 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 MFAP2P55001 183 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 RUNX1Q01196 453 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 CD69Q07108 199 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 BAXQ07812 192 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 ATP6V1FQ16864 119 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 ZNF343Q6P1L6 599 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 ACSM6Q6P461 480 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 ZNF546Q86UE3 836 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 TMEM252Q8N6L7 170 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 C11orf44Q8N8P7 122 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 SCARB1Q8WTV0 552 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 RANGRFQ9HD47 186 aaPredicted RBP11.1□□□□□ -0.63
SKA2-205ENST00000580541 OR5AC2Q9NZP5 309 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
SKA2-205ENST00000580541 FAM24AA6NFZ4 105 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 FNDC10F2Z333 226 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 H0YIZ8 118 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 K7EIM0 57 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
SKA2-205ENST00000580541 FCGR2BP31994 310 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms