RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 TMEM218A2RU14 115 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 CNIH1O95406 144 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 CD5P06127 495 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FGF8P55075 233 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FAM122CQ6P4D5 195 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MRPL41Q8IXM3 137 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 OR10G4Q8NGN3 311 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 OR10G9Q8NGN4 311 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 OR10G7Q8NGN6 311 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FAM103A1Q9BTL3 118 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 C7orf69Q9H7B7 122 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 PXMP4Q9Y6I8 212 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 YIF1AO95070 293 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 IGHV3-48P01763 117 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 OPRK1P41145 380 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 Q5PR19 223 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 OR2T6Q8NHC8 308 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 RNASEH2CQ8TDP1 164 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ABHD5Q8WTS1 349 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MBD3L1Q8WWY6 194 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
CDK5RAP3-218ENST00000580391 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 HMGB3O15347 200 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 HBE1P02100 147 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MBP02144 154 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 M6PRP20645 277 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 BRS3P32247 399 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 NDPQ00604 133 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FXYD3Q14802 87 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 CCDC28AQ8IWP9 274 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 EIF5A2Q9GZV4 153 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 TRAV1-1A0A0B4J248 108 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 BTBD17A6NE02 478 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 AVPP01185 164 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 FAM106CPP0CH98 169 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ACOT6Q3I5F7 207 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 LRRC75A-AS1Q8N1F1 130 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 STPG3Q8N7X2 389 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 Q8N9W7 124 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 ACY3Q96HD9 319 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 SLC35E1Q96K37 410 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 MRPL36Q9P0J6 103 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 DMRT1Q9Y5R6 373 aa11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-218ENST00000580391 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 A0A0U1RQK1 487 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SCO1O75880 301 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 APOC3P02656 99 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 GPX4P36969 197 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 B2MP61769 119 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 LINC01356Q8N9X3 169 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 OR1P1Q8NH06 330 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RARRES2Q99969 163 aa11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 GCN1Q92616 2671 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 OR10J1P30954 320 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CDC34P49427 236 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PPT1P50897 306 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CX3CL1P78423 397 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 HAGHQ16775 308 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 KLF17Q5JT82 389 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 KRTAP1-3Q8IUG1 177 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SLC39A9Q9NUM3 307 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 F8W036 122 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PRR20EP86478 221 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PRR20CP86479 221 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PRR20DP86480 221 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PRR20BP86481 221 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PRR20AP86496 221 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 LOXL1Q08397 574 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ARPC1AQ92747 370 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RAB24Q969Q5 203 aa11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-218ENST00000580391 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RBFOX3A6NFN3 312 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SOX15O60248 233 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CTRB1P17538 263 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 GATA2P23769 480 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RPL29P47914 159 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RAB31Q13636 194 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PEA15Q15121 130 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SRSF8Q9BRL6 282 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 GNG13Q9P2W3 67 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SLC45A2Q9UMX9 530 aa11.75□□□□□ -0.53
CDK5RAP3-218ENST00000580391 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms