RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 SPANXN5Q5MJ07 72 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 NOXA1Q86UR1 476 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 C11orf44Q8N8P7 122 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 OR4C12Q96R67 309 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 RNF126Q9BV68 326 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 THYN1Q9P016 225 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 FBXL7Q9UJT9 491 aa12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 STRAPQ9Y3F4 350 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-212ENST00000580061 FAM223BA6NKX1 122 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 E5RGE8 158 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 CORTO00230 105 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 NDUFB8O95169 186 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 PET100P0DJ07 73 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 RAB11AP62491 216 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 FGL1Q08830 312 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 HIST2H2BDQ6DRA6 164 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 PRSS54Q6PEW0 395 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 FAM223AQ8IWN6 122 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 ZNF491Q8N8L2 437 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 MISP3Q96FF7 219 aa12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 CITED2Q99967 270 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 RANGRFQ9HD47 186 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-212ENST00000580061 G3V3Q6 166 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 LYL1P12980 280 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 C15orf32Q32M92 178 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 Q5BKY6 102 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 OR2T35Q8NGX2 323 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 RNASEH2CQ8TDP1 164 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 UBE2E2Q96LR5 201 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 MBD2Q9UBB5 411 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 TENM1Q9UKZ4 2725 aa12.35□□□□□ -0.43
CSNK1D-212ENST00000580061 A0A0G2JLM5 398 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 PMS2P5A8MQ11 134 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 I3L2K1 104 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 K7EIM0 57 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 CCNKO75909 580 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 MT-CO2P00403 227 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 IFNA4P05014 189 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 P2RY1P47900 373 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 CAV2P51636 162 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 THAP6Q8TBB0 222 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 PINX1Q96BK5 328 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 MDFIQ99750 246 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 CITED1Q99966 193 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 ZNF747Q9BV97 191 aa12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 TSSC4Q9Y5U2 329 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-212ENST00000580061 MFSD2BA6NFX1 497 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 FAM24AA6NFZ4 105 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 METTL15P1P0C7V9 234 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 OPRK1P41145 380 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 CDX1P47902 265 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 KHDC1LQ5JSQ8 128 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 SCARB1Q8WTV0 552 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 CXorf58Q96LI9 332 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 GNB4Q9HAV0 340 aa12.33□□□□□ -0.44
CSNK1D-212ENST00000580061 IGHV3-21A0A0B4J1V1 117 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 PRSS46E5RG02 174 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 SMLR1H3BR10 107 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 SLC25A4P12235 298 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 CD69Q07108 199 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 MLANAQ16655 118 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 AKAP14Q86UN6 197 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 EEF1AKMT3Q96AZ1 226 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 S4R3C0 116 aa12.32□□□□□ -0.44
CSNK1D-212ENST00000580061 COL6A5A8TX70 2615 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 RPS10-NUDT3A0A1W2PQS6 291 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 IGSF23A1L1A6 192 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 IGHV3-48P01763 117 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 OR8G2PQ6IF36 304 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 ZNF343Q6P1L6 599 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 NDUFA11Q86Y39 141 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
CSNK1D-212ENST00000580061 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 IGHV3-23P01764 117 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 SULT1A1P50225 295 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms