RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 I3L2K1 104 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CHEK1O14757 476 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 LY6G6CO95867 125 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 IFNA17P01571 189 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 PPP5CP53041 499 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 UCP3P55916 312 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 PIGPP57054 158 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 HSPE1P61604 102 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZNF124Q15973 351 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TRIM16LQ309B1 348 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RNASE10Q5GAN6 216 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CADM3Q8N126 398 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 GBGT1Q8N5D6 347 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 SLC35G3Q8N808 338 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RNASE11Q8TAA1 199 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CMTM3Q96MX0 182 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 C6orf62Q9GZU0 229 aaPredicted RBP6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 FAM212BQ9NTI7 297 aaPredicted RBP6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 EXTL2Q9UBQ6 330 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 KLK11Q9UBX7 282 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 SMPXQ9UHP9 88 aa6.83□□□□□ -1.32
CDK5RAP3-211ENST00000578996 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 UBE2CO00762 179 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ST8SIA3O43173 380 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 NOL3O60936 208 aaKnown RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 GABARAPO95166 117 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CD3DP04234 171 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 FCGR2BP31994 310 aaPredicted RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 SNCAP37840 140 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 HOXA1P49639 335 aaPredicted RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 EWSR1Q01844 656 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 SCGB2B2Q4G0G5 96 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 LINC00299Q6ZSB3 139 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 Q6ZWC4 215 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CLVS1Q8IUQ0 354 aaPredicted RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZNF114Q8NC26 417 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 OR52I2Q8NH67 350 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 AP3S1Q92572 193 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 GALNT14Q96FL9 552 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TP53RKQ96S44 253 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TXN2Q99757 166 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 NXF2Q9GZY0 626 aaKnown RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 NAA50Q9GZZ1 169 aaKnown RBP6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TP53TG1Q9Y2A0 90 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ALMS1Q8TCU4 4167 aa6.82□□□□□ -1.32
CDK5RAP3-211ENST00000578996 KIR2DL5BA0A0G2JN68 375 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 KIR2DL5BA0A0G2JPC4 375 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 C3orf85A0A1B0GTC6 90 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 NUPR2A6NF83 97 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 H3BMQ9 156 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 DNASE2O00115 360 aaPredicted RBP6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RGS5O15539 181 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ATG12O94817 140 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 IGKV1-5P01602 117 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 NPBWR1P48145 328 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 PAFAH1B2P68402 229 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TNFRSF9Q07011 255 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 PLECQ15149 4684 aaKnown RBP6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 SP6Q3SY56 376 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 GPR107Q5VW38 600 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TCF24Q7RTU0 167 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ARRDC1Q8N5I2 433 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CCDC71LQ8N9Z2 235 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 DUSP18Q8NEJ0 188 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 LINC00476Q8WZB0 136 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ST8SIA2Q92186 375 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RNF183Q96D59 192 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZNF486Q96H40 463 aaPredicted RBP6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 OR10C1Q96KK4 312 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 GINS3Q9BRX5 216 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 MAP6D1Q9H9H5 199 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ENY2Q9NPA8 101 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 COPZ2Q9P299 210 aa6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 PUS1Q9Y606 427 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CCDC160A6NGH7 325 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 APOHP02749 345 aaPredicted RBP6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZNF182P17025 639 aaPredicted RBP6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 OPRK1P41145 380 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ETV6P41212 452 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 SUB1P53999 127 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RND3P61587 244 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CTF1Q16619 201 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TOMM20LQ6UXN7 152 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZNF600Q6ZNG1 722 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 LHFPL1Q86WI0 220 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 TMEM217Q8N7C4 229 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 OR4D10Q8NGI6 311 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZFAND1Q8TCF1 268 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RRNAD1Q96FB5 475 aaKnown RBP6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 ZNF414Q96IQ9 312 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
CDK5RAP3-211ENST00000578996 A0A0B4J293 547 aa6.79□□□□□ -1.32
CDK5RAP3-211ENST00000578996 MPTX1A8MV57 137 aa6.79□□□□□ -1.32
CDK5RAP3-211ENST00000578996 DFFBO76075 338 aa6.79□□□□□ -1.32
CDK5RAP3-211ENST00000578996 RAB3DO95716 219 aa6.79□□□□□ -1.32
CDK5RAP3-211ENST00000578996 CA1P00915 261 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms