RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SLC25A42Q86VD7 318 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 SLC38A6Q8IZM9 456 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 OR10W1Q8NGF6 305 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 OR10J5Q8NHC4 309 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 TMEM170AQ8WVE7 144 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 PHYHIPQ92561 330 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 MARC2Q969Z3 335 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 ADTRPQ96IZ2 230 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 OR2A7Q96R45 310 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 RNF2Q99496 336 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 GINS4Q9BRT9 223 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 DCUN1D5Q9BTE7 237 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 URM1Q9BTM9 101 aaKnown RBP2.84□□□□□ -1.95
PTPRM-206ENST00000578093 C20orf24Q9BUV8 137 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 C9orf16Q9BUW7 83 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 MFFQ9GZY8 342 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 CSTL1Q9H114 145 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 OR51E2Q9H255 320 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 PLGRKTQ9HBL7 147 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 DAZ1Q9NQZ3 744 aaKnown RBP2.84□□□□□ -1.95
PTPRM-206ENST00000578093 RHBDL2Q9NX52 303 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 SMPD3Q9NY59 655 aaPredicted RBP2.84□□□□□ -1.95
PTPRM-206ENST00000578093 NDUFA13Q9P0J0 144 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 MGAT4AQ9UM21 535 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 SPATA2Q9UM82 520 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 LSM2Q9Y333 95 aaKnown RBP2.84□□□□□ -1.95
PTPRM-206ENST00000578093 RBMX2Q9Y388 322 aaKnown RBP2.84□□□□□ -1.95
PTPRM-206ENST00000578093 UFC1Q9Y3C8 167 aa2.84□□□□□ -1.95
PTPRM-206ENST00000578093 RBM7Q9Y580 266 aaKnown RBP2.84□□□□□ -1.95
PTPRM-206ENST00000578093 TRBV7-1A0A0A6YYK4 115 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 RPS10-NUDT3A0A1W2PQS6 291 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 IRGMA1A4Y4 181 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 K7EIM0 57 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CHEK1O14757 476 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TNFSF12O43508 249 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 DENRO43583 198 aaKnown RBP2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CREBL2O60519 120 aaPredicted RBP2.83□□□□□ -1.96
PTPRM-206ENST00000578093 HLA-DQB1P01920 261 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CDK1P06493 297 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 PTHLHP12272 177 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 HIST1H1DP16402 221 aaKnown RBP2.83□□□□□ -1.96
PTPRM-206ENST00000578093 HLA-GP17693 338 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CRHBPP24387 322 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 MAP2K4P45985 399 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TCTAP57738 103 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 OR10A3P58181 314 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 WT1-ASQ06250 92 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TMEM187Q14656 261 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 MED22Q15528 200 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 RAB11BQ15907 218 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 HES5Q5TA89 166 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 LIPKQ5VXJ0 399 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TTC23Q5W5X9 447 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 ZNF773Q6PK81 442 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 Q6ZR54 194 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CROCCP3Q8IVE0 287 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 GBGT1Q8N5D6 347 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 ARL6IP6Q8N6S5 226 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 MAPKAPK5-AS1Q8N8E1 139 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 ZNF555Q8NEP9 628 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 OR56B1Q8NGI3 324 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 OR4S2Q8NH73 311 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 OR4A5Q8NH83 315 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TCTEX1D2Q8WW35 142 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CYGBQ8WWM9 190 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TMEM203Q969S6 136 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 FAM3DQ96BQ1 224 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 RAB3CQ96E17 227 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 RNF125Q96EQ8 232 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 CXorf58Q96LI9 332 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 RBM38Q9H0Z9 239 aaKnown RBP2.83□□□□□ -1.96
PTPRM-206ENST00000578093 HRH4Q9H3N8 390 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 BET1LQ9NYM9 111 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 TAS2R8Q9NYW2 309 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 PSORS1C1Q9UIG5 152 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 MRPS7Q9Y2R9 242 aaKnown RBP2.83□□□□□ -1.96
PTPRM-206ENST00000578093 ETV7Q9Y603 341 aa2.83□□□□□ -1.96
PTPRM-206ENST00000578093 DMBT1Q9UGM3 2413 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 LRP1Q07954 4544 aaKnown RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 TRAV10A0A0B4J240 114 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 IGHV3-66A0A0C4DH42 116 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 IGHV7-4-1A0A0J9YVY3 117 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 SMIM30A4D0T7 59 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 C15orf61A6NNL5 157 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 ZNF705EA8MWA4 302 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 C11orf94C9JXX5 98 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 NDUFA4O00483 81 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 NUPL2O15504 423 aaKnown RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 SSX5O60225 188 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 DIRAS3O95661 229 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 APOHP02749 345 aaPredicted RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 IGKV2-30P06310 120 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 DEFA4P12838 97 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 HIST1H1BP16401 226 aaKnown RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 CD36P16671 472 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 MAS1LP35410 378 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 DEFB131AP59861 70 aa2.82□□□□□ -1.96
PTPRM-206ENST00000578093 RPL8P62917 257 aaKnown RBP2.82□□□□□ -1.96
PTPRM-206ENST00000578093 FABP5Q01469 135 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms