RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 PRELID3AQ96N28 172 aa8.65□□□□□ -1.03
PTPRM-205ENST00000577827 ABCA7Q8IZY2 2146 aa8.65□□□□□ -1.03
PTPRM-205ENST00000577827 THSD7BQ9C0I4 1608 aa8.65□□□□□ -1.03
PTPRM-205ENST00000577827 IGHV3-72A0A0B4J1Y9 119 aa8.65□□□□□ -1.03
PTPRM-205ENST00000577827 DEFB124Q8NES8 71 aa8.65□□□□□ -1.03
PTPRM-205ENST00000577827 TMEM208Q9BTX3 173 aa8.65□□□□□ -1.03
PTPRM-205ENST00000577827 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 MOSP00540 346 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 ANOS1P23352 680 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 SEC11AP67812 179 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 CX3CL1P78423 397 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 Q0VG73 95 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 DEPPQ9NTK1 212 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 EPDR1Q9UM22 224 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 C5orf30Q96GV9 206 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 DCTN5Q9BTE1 182 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 LINC00312Q9Y6C7 94 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 OR4X2Q8NGF9 303 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-205ENST00000577827 RNF115Q9Y4L5 304 aa8.64□□□□□ -1.03
PTPRM-205ENST00000577827 IGHV2OR16-5A0A0B4J2B6 119 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 IGHV1-2P23083 117 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 CD40P25942 277 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 TFPI2P48307 235 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 FOXF2Q12947 444 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ORMDL3Q8N138 153 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 RALYQ9UKM9 306 aaKnown RBP8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ASXL3Q9C0F0 2248 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 SAA2-SAA4A0A096LPE2 208 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 A0A1B0GV72 72 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ATP5LO75964 103 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 GPX1P07203 203 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 SAA2P0DJI9 122 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-205ENST00000577827 LTBRP36941 435 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 GPR6P46095 362 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-205ENST00000577827 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 Q6ZRM9 215 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ANAPC1Q9H1A4 1944 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 TCRBV4S1A1TA0A5B7 111 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 WIPF3A6NGB9 483 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 FNDC10F2Z333 226 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 EREGO14944 169 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 SNCGO76070 127 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ZNF883P0CG24 379 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 GATA2P23769 480 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ZNF841Q6ZN19 808 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 MUC15Q8N387 334 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 ST6GALNAC6Q969X2 333 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 RABAC1Q9UI14 185 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 A6NNC1 897 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 TTC9CQ8N5M4 171 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-205ENST00000577827 DERL1Q9BUN8 251 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 CLEC7AQ9BXN2 247 aa8.63□□□□□ -1.03
PTPRM-205ENST00000577827 SS18L1O75177 396 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-205ENST00000577827 REG1AP05451 166 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 MGPP08493 103 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 SAA1P0DJI8 122 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-205ENST00000577827 PAX9P55771 341 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 Q6P435 159 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 Q9H3A6 140 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 LPAR2Q9HBW0 351 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 CLEC5AQ9NY25 188 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 SPCS1Q9Y6A9 102 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 OR11H12B2RN74 326 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 H3BTX0 84 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 F2RL2O00254 374 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 TMEM50AO95807 157 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 RELQ04864 619 aaPredicted RBP8.62□□□□□ -1.03
PTPRM-205ENST00000577827 OR11H1Q8NG94 326 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 OR11H2Q8NH07 326 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 MGST2Q99735 147 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 F11RQ9Y624 299 aaKnown RBP8.62□□□□□ -1.03
PTPRM-205ENST00000577827 SPTA1P02549 2419 aa8.62□□□□□ -1.03
PTPRM-205ENST00000577827 M0R3E3 92 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 TEX45Q8NA69 505 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 ZNF502Q8TBZ5 544 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 JKAMPQ9P055 326 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 C7orf71A4D174 169 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 C15orf62A8K5M9 175 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 IGHV3-48P01763 117 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 IL4P05112 153 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 CELA3BP08861 270 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 COLCA1Q6ZS62 124 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 SNHG12Q9BXW3 62 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 POLR3KQ9Y2Y1 108 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-205ENST00000577827 E9PLN8 166 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 IGLV3-1P01715 115 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 GFRA1P56159 465 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 ZFP36L1Q07352 338 aaKnown RBP8.61□□□□□ -1.03
PTPRM-205ENST00000577827 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
PTPRM-205ENST00000577827 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms