RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 S100A7P31151 101 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 RPL30P62888 115 aaKnown RBP11.32□□□□□ -0.6
RNF43-202ENST00000577625 LTC4SQ16873 150 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 C17orf58Q2M2W7 97 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 ITLN2Q8WWU7 325 aaPredicted RBP11.32□□□□□ -0.6
RNF43-202ENST00000577625 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 SLC35D1Q9NTN3 355 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 RHOGP84095 191 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 Q8N976 141 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 LHX4Q969G2 390 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 FCN3O75636 299 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 CLDN14O95500 239 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 CRISP2P16562 243 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 PAX9P55771 341 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 C16orf54Q6UWD8 224 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 Q6ZVH6 145 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 HSD17B10Q99714 261 aaKnown RBP11.31□□□□□ -0.6
RNF43-202ENST00000577625 CLN8Q9UBY8 286 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 DCHS2Q6V1P9 2916 aa11.31□□□□□ -0.6
RNF43-202ENST00000577625 IGHV1-69-2A0A0G2JMI3 117 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 TNFRSF13BO14836 293 aaPredicted RBP11.3□□□□□ -0.6
RNF43-202ENST00000577625 CLDN1O95832 211 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
RNF43-202ENST00000577625 Q6ZRM9 215 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 SLC39A9Q9NUM3 307 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 FBXL7Q9UJT9 491 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 KIAA1324LA8MWY0 1029 aaPredicted RBP11.3□□□□□ -0.6
RNF43-202ENST00000577625 RAMP3O60896 148 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 TSPOP30536 169 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 BMI1P35226 326 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 GPR12P47775 334 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 BRWD1-AS2P59051 145 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 FFAR4Q5NUL3 377 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
RNF43-202ENST00000577625 SPTAN1Q13813 2472 aaKnown RBP11.29□□□□□ -0.6
RNF43-202ENST00000577625 K7ERU9 68 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 KRTDAPP60985 99 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 VAMP3Q15836 100 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 TMEM30BQ3MIR4 351 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 UTF1Q5T230 341 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 PNKDQ8N490 385 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 OR4F5Q8NH21 305 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 MRPL27Q9P0M9 148 aaKnown RBP11.29□□□□□ -0.6
RNF43-202ENST00000577625 SLC25A10Q9UBX3 287 aaPredicted RBP11.29□□□□□ -0.6
RNF43-202ENST00000577625 FLNCQ14315 2725 aa11.29□□□□□ -0.6
RNF43-202ENST00000577625 hADV38S2A0JD32 116 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 LINC00473A8K010 186 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 C17orf98A8MV24 154 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 PROP1O75360 226 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 KRASP01116 189 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 PPOXP50336 477 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 ZNF134P52741 427 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 Q0VG73 95 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 LHFPL4Q7Z7J7 247 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 BAGE2Q86Y30 109 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 IFI27L2Q9H2X8 130 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 LINC00312Q9Y6C7 94 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 IGHV2-26A0A0B4J1V2 119 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 P0C879 139 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
RNF43-202ENST00000577625 MEF2CQ06413 473 aaPredicted RBP11.28□□□□□ -0.6
RNF43-202ENST00000577625 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 NEIL1Q96FI4 390 aaPredicted RBP11.28□□□□□ -0.6
RNF43-202ENST00000577625 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
RNF43-202ENST00000577625 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 S1PR2O95136 353 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 NXPH3O95157 252 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 IGHV3-7P01780 117 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 GPX1P07203 203 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 ARF6P62330 175 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 TMEM267Q0VDI3 215 aaPredicted RBP11.27□□□□□ -0.6
RNF43-202ENST00000577625 ZNF816Q0VGE8 651 aaPredicted RBP11.27□□□□□ -0.6
RNF43-202ENST00000577625 RAB40CQ96S21 281 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 CTSZQ9UBR2 303 aa11.27□□□□□ -0.6
RNF43-202ENST00000577625 USP9XQ93008 2570 aaPredicted RBP11.27□□□□□ -0.61
RNF43-202ENST00000577625 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.61
RNF43-202ENST00000577625 ZNF253O75346 499 aa11.27□□□□□ -0.61
RNF43-202ENST00000577625 C11orf71Q6IPW1 123 aa11.27□□□□□ -0.61
RNF43-202ENST00000577625 ZNF525Q8N782 197 aa11.27□□□□□ -0.61
RNF43-202ENST00000577625 KAAG1Q9UBP8 84 aa11.27□□□□□ -0.61
RNF43-202ENST00000577625 DOPEY1Q5JWR5 2465 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
RNF43-202ENST00000577625 LYNX1G3V0Z9 82 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms