RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 NUP153P49790 1475 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 ATRNO75882 1429 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 CLTCL1P53675 1640 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 MADDQ8WXG6 1647 aa2.24□□□□□ -2.05
SMCHD1-202ENST00000577300 N4BP2Q86UW6 1770 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH9P35579 1960 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 ARHGEF12Q9NZN5 1544 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 A0A087X0T9 212 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 TMED7-TICAM2A0A0A6YYA0 188 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 MUC21A0A0G2JKD1 596 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 A0A0G2JND7 137 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 TCRBV3S1A0A5B6 114 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 C5orf63A6NC05 138 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 RBFOX3A6NFN3 312 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 GGT3PA6NGU5 568 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 GGTLC3B5MD39 225 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 C9JQL5 133 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 FNDC10F2Z333 226 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 K7EQS6 105 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OVOL1O14753 267 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 RER1O15258 196 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 LYRM1O43325 122 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 HYPMO75409 117 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 DHRS3O75911 302 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2A4O95047 310 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 UBL3O95164 117 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 LSM8O95777 96 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 IGHMP01871 453 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 FGF6P10767 208 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 CTSEP14091 401 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 RPA3P35244 121 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 SNCAP37840 140 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 TPPP2P59282 170 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 RPS23P62266 143 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 SP4Q02446 784 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 ATP5G2Q06055 141 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 KLRD1Q13241 179 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 EIF3IQ13347 325 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 IBA57Q5T440 356 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 Q6Q795 121 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM14EPQ6UXP3 125 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 Q6ZUT4 128 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM150AQ86TG1 271 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 PIANPQ8IYJ0 282 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 KCNRGQ8N5I3 272 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 TEX29Q8N6K0 151 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2M3Q8NG83 312 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2T35Q8NGX2 323 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OR5AK2Q8NH90 309 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF502Q8TBZ5 544 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 C15orf40Q8WUR7 153 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 ARPC1AQ92747 370 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 KLK6Q92876 244 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 BORCS7Q96B45 105 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2A7Q96R45 310 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 IMMP2LQ96T52 175 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 MRPL45Q9BRJ2 306 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF670Q9BS34 389 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 MRPL32Q9BYC8 188 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 OR51E2Q9H255 320 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 BANF2Q9H503 90 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 DUSP21Q9H596 190 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 HEBP1Q9NRV9 189 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 RBM22Q9NW64 420 aaKnown RBP eCLIP2.23□□□□□ -2.051e-7■■■■■ 31.6
SMCHD1-202ENST00000577300 KCNIP1Q9NZI2 227 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 MED31Q9Y3C7 131 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 SOX21Q9Y651 276 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 LAMC1P11047 1609 aa2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 PRG4Q92954 1404 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-202ENST00000577300 CUX1P39880 1505 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 TRGV10A0A0A0MS01 117 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 LOC100131303A0A0U1RQF7 123 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 FAM236AA0A1B0GUQ0 79 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 FAM236BA0A1B0GV22 79 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 TCRBV9S1A1TA0A576 114 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF670-ZNF695F2Z2N8 137 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 J3QQQ9 107 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 KLF7O75840 302 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SFT2D2O95562 160 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 MRPL3P09001 348 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SFTA3P0C7M3 94 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC25A6P12236 298 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 GADD45AP24522 165 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 FKBP2P26885 142 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 GUCA1AP43080 201 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 NMUP48645 174 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 NUDT2P50583 147 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 FOXA3P55318 350 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OSTNP61366 133 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 HERVK_113P63121 156 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ARFRP1Q13795 201 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ELOBQ15370 118 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF726P1Q15940 193 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SP6Q3SY56 376 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SPANXN3Q5MJ09 141 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 VAX1Q5SQQ9 334 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 FAM201AQ5SY85 155 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 LCN12Q6JVE5 192 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SBSNQ6UWP8 590 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms