RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
LITAF-217ENST00000575426 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
LITAF-217ENST00000575426 NOTCH1P46531 2555 aa11.68□□□□□ -0.54
LITAF-217ENST00000575426 CORTO00230 105 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 SAP30O75446 220 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 H2AFB2P0C5Z0 115 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 MFAP2P55001 183 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 SYNJ2BPP57105 145 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 DEFA1P59665 94 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 DEFA3P59666 94 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 KPRPQ5T749 579 aaPredicted RBP11.67□□□□□ -0.54
LITAF-217ENST00000575426 PLET1Q6UQ28 207 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
LITAF-217ENST00000575426 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 NUDT15Q9NV35 164 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 GAR1Q9NY12 217 aaKnown RBP11.67□□□□□ -0.54
LITAF-217ENST00000575426 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 TBC1D24Q9ULP9 559 aa11.67□□□□□ -0.54
LITAF-217ENST00000575426 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 SLC25A6P12236 298 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 GPR183P32249 361 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 HTR2BP41595 481 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 FAM106AQ4KMX7 169 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 PDLIM3Q53GG5 364 aaPredicted RBP11.66□□□□□ -0.54
LITAF-217ENST00000575426 Q56UQ5 140 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 ACSM6Q6P461 480 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 NOXA1Q86UR1 476 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 SCARB1Q8WTV0 552 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
LITAF-217ENST00000575426 CMYA5Q8N3K9 4069 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 K7EIM0 57 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 MED6O75586 246 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 OR2C1O95371 312 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 MT-CO2P00403 227 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
LITAF-217ENST00000575426 MFAP4P55083 255 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 GGNBP1Q5YKI7 109 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 OR9G4Q8NGQ1 327 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 ZC4H2Q9NQZ6 224 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 HSPB7Q9UBY9 170 aa11.65□□□□□ -0.54
LITAF-217ENST00000575426 OR2T8A6NH00 312 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 TGOLN2O43493 480 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 WIPF1O43516 503 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 SPSB3Q6PJ21 355 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 DUSP18Q8NEJ0 188 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 OR52B4Q8NGK2 314 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 BSCL2Q96G97 398 aaPredicted RBP11.64□□□□□ -0.55
LITAF-217ENST00000575426 TXN2Q99757 166 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 RBKSQ9H477 322 aa11.64□□□□□ -0.55
LITAF-217ENST00000575426 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 I3L2K1 104 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 ADAP1O75689 374 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 IFNA10P01566 189 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 IFITM3Q01628 133 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 EGFEM1PQ0D2K5 195 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 C2orf83Q53S99 150 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 UXS1Q8NBZ7 420 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 SLC24A4Q8NFF2 622 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 MITD1Q8WV92 249 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 U3KQ87 197 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 SORL1Q92673 2214 aa11.63□□□□□ -0.55
LITAF-217ENST00000575426 RPS10-NUDT3A0A1W2PQS6 291 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 LGALS9O00182 355 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 NUPL2O15504 423 aaKnown RBP11.62□□□□□ -0.55
LITAF-217ENST00000575426 GNG7O60262 68 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 PITX3O75364 302 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 PRB2P02812 416 aaPredicted RBP11.62□□□□□ -0.55
LITAF-217ENST00000575426 NPY1RP25929 384 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 OPRK1P41145 380 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 NPBWR1P48145 328 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 ZNF431Q8TF32 576 aaPredicted RBP11.62□□□□□ -0.55
LITAF-217ENST00000575426 SEC22CQ9BRL7 303 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 PALMDQ9NP74 551 aa11.62□□□□□ -0.55
LITAF-217ENST00000575426 WRBO00258 174 aa11.61□□□□□ -0.55
LITAF-217ENST00000575426 SCGB2A1O75556 95 aa11.61□□□□□ -0.55
LITAF-217ENST00000575426 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
LITAF-217ENST00000575426 ATP5IP56385 69 aaPredicted RBP11.61□□□□□ -0.55
LITAF-217ENST00000575426 KRTAP10-11P60412 298 aa11.61□□□□□ -0.55
LITAF-217ENST00000575426 RPP30P78346 268 aaKnown RBP11.61□□□□□ -0.55
LITAF-217ENST00000575426 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
LITAF-217ENST00000575426 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
LITAF-217ENST00000575426 RNASEH2CQ8TDP1 164 aaKnown RBP11.61□□□□□ -0.55
LITAF-217ENST00000575426 CIB3Q96Q77 187 aaPredicted RBP11.61□□□□□ -0.55
LITAF-217ENST00000575426 GPN1Q9HCN4 374 aaPredicted RBP11.61□□□□□ -0.55
LITAF-217ENST00000575426 AURKAIP1Q9NWT8 199 aaPredicted RBP11.61□□□□□ -0.55
LITAF-217ENST00000575426 IGHV3-35A0A0C4DH35 117 aa11.6□□□□□ -0.55
LITAF-217ENST00000575426 SYNGR2O43760 224 aa11.6□□□□□ -0.55
LITAF-217ENST00000575426 LY86O95711 162 aa11.6□□□□□ -0.55
LITAF-217ENST00000575426 IL5P05113 134 aa11.6□□□□□ -0.55
LITAF-217ENST00000575426 CSN3P07498 182 aa11.6□□□□□ -0.55
LITAF-217ENST00000575426 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
LITAF-217ENST00000575426 RELQ04864 619 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms