RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 GGTLC1Q9BX51 225 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 CHODLQ9H9P2 273 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 TRGV10A0A0A0MS01 117 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 IZUMO1RA6ND01 250 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 C9JCJ5 164 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 AESQ08117 197 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 EFNB3Q15768 340 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 WIPI1Q5MNZ9 446 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-212ENST00000574799 OR10D3Q8NH80 312 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 TPPP3Q9BW30 176 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 RTL8AQ9BWD3 113 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 OBP2BQ9NPH6 170 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 POLDIP2Q9Y2S7 368 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 FREM1Q5H8C1 2179 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 A0A1B0GV72 72 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 CD5LO43866 347 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 HBZP02008 142 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 BMI1P35226 326 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 ARF6P62330 175 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 RNPS1Q15287 305 aaKnown RBP7.94□□□□□ -1.14
CCDC40-212ENST00000574799 SRSF7Q16629 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC40-212ENST00000574799 FAM71F2Q6NXP2 309 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 SARAFQ96BY9 339 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 FAM231BA6NCW3 169 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 C15orf62A8K5M9 175 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 J3QR89 54 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 HLA-DRB1P01911 266 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 FAM53AQ6NSI3 398 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-212ENST00000574799 PET117Q6UWS5 81 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 DEFB125Q8N687 156 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 MGST2Q99735 147 aa7.94□□□□□ -1.14
CCDC40-212ENST00000574799 TNRC6AQ8NDV7 1962 aaKnown RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 ZNF207O43670 478 aaKnown RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 HIST1H1AQ02539 215 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 RPS19BP1Q86WX3 136 aaKnown RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 ZBTB34Q8NCN2 500 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 OR2M7Q8NG81 312 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 OR2K2Q8NGT1 345 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 MRPL27Q9P0M9 148 aaKnown RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 ABI3Q9P2A4 366 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 LOXL2Q9Y4K0 774 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 DCHS2Q6V1P9 2916 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SPINT2O43291 252 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 VWA1Q6PCB0 445 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 Q6ZSR3 168 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 LINC00596Q86U02 117 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SF3B5Q9BWJ5 86 aaKnown RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 TNFRSF19Q9NS68 423 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SAA2-SAA4A0A096LPE2 208 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 ZNF716A6NP11 495 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 J3QT63 122 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SMPD2O60906 423 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SRD5A2P31213 254 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 CLDN18P56856 261 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 KRTAP27-1Q3LI81 207 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 TM4SF20Q53R12 229 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 SPACA3Q8IXA5 215 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 TNFRSF14Q92956 283 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 S1PR3Q99500 378 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 REPIN1Q9BWE0 567 aaKnown RBP7.93□□□□□ -1.14
CCDC40-212ENST00000574799 GP6Q9HCN6 339 aa7.93□□□□□ -1.14
CCDC40-212ENST00000574799 HIGD1CA8MV81 97 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 CELA3BP08861 270 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 IGFBP2P18065 325 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 YLPM1P49750 1951 aaKnown RBP7.92□□□□□ -1.14
CCDC40-212ENST00000574799 DHRS13Q6UX07 377 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 OR8A1Q8NGG7 326 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 OR10AG1Q8NH19 301 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 PRDM14Q9GZV8 571 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 ZNF835Q9Y2P0 537 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 SYS1-DBNDD2H3BUS1 97 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 RHOGP84095 191 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 TMEM97Q5BJF2 176 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 TMEM116Q8NCL8 245 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 OR4F17Q8NGA8 305 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 NABP2Q9BQ15 211 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 PLGLB1Q02325 96 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 DAZAP2Q15038 168 aaPredicted RBP7.92□□□□□ -1.14
CCDC40-212ENST00000574799 FA2HQ7L5A8 372 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 KIR3DL3Q8N743 410 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 HES7Q9BYE0 225 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 MPC1Q9Y5U8 109 aa7.92□□□□□ -1.14
CCDC40-212ENST00000574799 SPTA1P02549 2419 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 CELA3AP09093 270 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 FABP2P12104 132 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 CD24P25063 80 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 RTL8BQ17RB0 113 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 PRSS3P2Q8NHM4 247 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 NEUROG1Q92886 237 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 C1QTNF5Q9BXJ0 243 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 TEX50A0A1B0GTY4 177 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 C12orf77C9JDV5 145 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 NDUFS8O00217 210 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 REG1AP05451 166 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 OR9G9P0C7N8 305 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 C5orf17Q8NAS9 161 aa7.91□□□□□ -1.14
CCDC40-212ENST00000574799 PGLYRP4Q96LB8 373 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms