RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 TTC32Q5I0X7 151 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 FAM159AQ6UWV7 190 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 Q9H3A6 140 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 C17orf100A8MU93 164 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 SRRM5B3KS81 715 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 MOSP00540 346 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 HSD52Q0P140 79 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 OR5AN1Q8NGI8 311 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 FAM57AQ8TBR7 257 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 JKAMPQ9P055 326 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 RAXQ9Y2V3 346 aa10.35□□□□□ -0.75
PCDHGA9-201ENST00000573521 CHD5Q8TDI0 1954 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 PDLIM4P50479 330 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 WDR82Q6UXN9 313 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 MIR17HGQ75NE6 70 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 ZIC4Q8N9L1 334 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 PIMREGQ9BSJ6 248 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 ALKBH7Q9BT30 221 aaPredicted RBP10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 NTN3O00634 580 aaPredicted RBP10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 IGHV1-2P23083 117 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 PLAUP00749 431 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 AMBPP02760 352 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 ADMP35318 185 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 PNRC2Q9NPJ4 139 aaKnown RBP10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 SP9P0CG40 484 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 LINC01551Q86U37 167 aa10.34□□□□□ -0.75
PCDHGA9-201ENST00000573521 GREB1Q4ZG55 1949 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 H3BRM9 83 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 SLC17A3O00476 420 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 UQCRFS1P47985 274 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 GPHA2Q96T91 129 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 SSBP3Q9BWW4 388 aaPredicted RBP10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 OCC1Q8TAD7 63 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 C8orf46Q8TAG6 207 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 NEU1Q99519 415 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 RPUSD1Q9UJJ7 312 aaKnown RBP10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 MUC15Q8N387 334 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 ZNRF1Q8ND25 227 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 TRGV9Q99603 122 aa10.33□□□□□ -0.76
PCDHGA9-201ENST00000573521 NKX2-8O15522 239 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 SAA1P0DJI8 122 aaPredicted RBP10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 HILPDAQ9Y5L2 63 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 C7orf71A4D174 169 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 CSRP2Q16527 193 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 SPCS1Q9Y6A9 102 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 RHOGP84095 191 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 TGIF1Q15583 401 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 ZNF124Q15973 351 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 ARPC1AQ92747 370 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 SIGLEC12Q96PQ1 595 aa10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 ZNF71Q9NQZ8 489 aaPredicted RBP10.32□□□□□ -0.76
PCDHGA9-201ENST00000573521 IGKV1-12A0A0C4DH73 117 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 SPAARA0A1B0GVQ0 90 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 IGKV1D-12P01611 117 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 CLPSP04118 112 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 PF4V1P10720 104 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 EGR1P18146 543 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 NUTF2P61970 127 aaKnown RBP10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 Q0VG73 95 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 MMP23AO75900 390 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 TMEM167AQ8TBQ9 72 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 ORAOV1Q8WV07 137 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 DOCK6Q96HP0 2047 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 MRPL20Q9BYC9 149 aaKnown RBP10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 TMEM133Q9H2Q1 129 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 IGHV3-21A0A0B4J1V1 117 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 NBR2O15453 112 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 DPM2O94777 84 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 ERVK11-1P61568 191 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 VKORC1L1Q8N0U8 176 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
PCDHGA9-201ENST00000573521 IGHV3-72A0A0B4J1Y9 119 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 YAE1D1Q9NRH1 226 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 IGKV1D-8A0A087WSZ0 117 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 UBE2L6O14933 153 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 CT83Q5H943 113 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 PGPEP1LA6NFU8 196 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 C3orf36Q3SXR2 165 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 PPP1R27Q86WC6 154 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms