RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 CCL24O00175 119 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 GOSR2O14653 212 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 CYB5BO43169 146 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 SYNGR2O43760 224 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 HTR2BP41595 481 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 POLR2GP62487 172 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB40B-207ENST00000572603 IL15RAQ13261 267 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 C2orf83Q53S99 150 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 C2orf50Q96LR7 162 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 THYN1Q9P016 225 aa17.01■□□□□ 0.31
RAB40B-207ENST00000572603 RCL1Q9Y2P8 373 aaKnown RBP17.01■□□□□ 0.31
RAB40B-207ENST00000572603 MGAM2Q2M2H8 2515 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17■□□□□ 0.31
RAB40B-207ENST00000572603 C5orf51A6NDU8 294 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 MED6O75586 246 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 SIX6O95475 246 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 IGHV3-23P01764 117 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 NPY1RP25929 384 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 MYCNOSP40205 109 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 GSG1LQ6UXU4 331 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 LINC00482Q8N8I6 264 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 OR11H1Q8NG94 326 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 ZNF502Q8TBZ5 544 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 VN1R17PQ8TDU5 208 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 MISP3Q96FF7 219 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 HIPK2Q9H2X6 1198 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 GSKIPQ9P0R6 139 aa17■□□□□ 0.31
RAB40B-207ENST00000572603 IGHV3-21A0A0B4J1V1 117 aa16.99■□□□□ 0.31
RAB40B-207ENST00000572603 ANKRD34BA5PLL1 514 aa16.99■□□□□ 0.31
RAB40B-207ENST00000572603 F8W735 103 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-207ENST00000572603 SSNA1O43805 119 aa16.99■□□□□ 0.31
RAB40B-207ENST00000572603 MBPP02686 304 aaPredicted RBP16.99■□□□□ 0.31
RAB40B-207ENST00000572603 OR1N2Q8NGR9 330 aa16.99■□□□□ 0.31
RAB40B-207ENST00000572603 EEF1AKMT3Q96AZ1 226 aa16.99■□□□□ 0.31
RAB40B-207ENST00000572603 CXorf58Q96LI9 332 aa16.99■□□□□ 0.31
RAB40B-207ENST00000572603 C15orf62A8K5M9 175 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 TMEM50AO95807 157 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 SCGB1D2O95969 90 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 MT-CO2P00403 227 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 HSPB1P04792 205 aaKnown RBP16.98■□□□□ 0.31
RAB40B-207ENST00000572603 SUB1P53999 127 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB40B-207ENST00000572603 ZNF616Q08AN1 781 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 SCARB1Q8WTV0 552 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 OR4C12Q96R67 309 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 FNDC4Q9H6D8 234 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-207ENST00000572603 PEF1Q9UBV8 284 aaKnown RBP16.98■□□□□ 0.31
RAB40B-207ENST00000572603 U3KQ87 197 aa16.98■□□□□ 0.31
RAB40B-207ENST00000572603 LINC01619G3V211 115 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 BMPR1BO00238 502 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 WRBO00258 174 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 SSSCA1O60232 199 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 PF4P02776 101 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 H2BFSP57053 126 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 CIB3Q96Q77 187 aaPredicted RBP16.97■□□□□ 0.31
RAB40B-207ENST00000572603 C11orf1Q9H5F2 150 aa16.97■□□□□ 0.31
RAB40B-207ENST00000572603 TRBV7-1A0A0A6YYK4 115 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 CORTO00230 105 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 IFNA10P01566 189 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 SLURP1P55000 103 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 PAX9P55771 341 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 CLEC19AQ6UXS0 136 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 PINX1Q96BK5 328 aaKnown RBP16.96■□□□□ 0.31
RAB40B-207ENST00000572603 WDR89Q96FK6 387 aaPredicted RBP16.96■□□□□ 0.31
RAB40B-207ENST00000572603 RANGRFQ9HD47 186 aaPredicted RBP16.96■□□□□ 0.31
RAB40B-207ENST00000572603 C21orf62Q9NYP8 219 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 MGAT4CQ9UBM8 478 aa16.96■□□□□ 0.31
RAB40B-207ENST00000572603 PPP5D1E7EU14 171 aa16.95■□□□□ 0.3
RAB40B-207ENST00000572603 K7EPK0 472 aa16.95■□□□□ 0.3
RAB40B-207ENST00000572603 IGHV3-48P01763 117 aa16.95■□□□□ 0.3
RAB40B-207ENST00000572603 OR8U8P0C7N1 319 aa16.95■□□□□ 0.3
RAB40B-207ENST00000572603 FAM209BQ5JX69 171 aa16.95■□□□□ 0.3
RAB40B-207ENST00000572603 TREML4Q6UXN2 200 aa16.95■□□□□ 0.3
RAB40B-207ENST00000572603 RNASEH2CQ8TDP1 164 aaKnown RBP16.95■□□□□ 0.3
RAB40B-207ENST00000572603 MRPL36Q9P0J6 103 aaKnown RBP16.95■□□□□ 0.3
RAB40B-207ENST00000572603 H3BP45 60 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 HOXD3P31249 432 aaPredicted RBP16.94■□□□□ 0.3
RAB40B-207ENST00000572603 FCGR2BP31994 310 aaPredicted RBP16.94■□□□□ 0.3
RAB40B-207ENST00000572603 GPR183P32249 361 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 ATP5IP56385 69 aaPredicted RBP16.94■□□□□ 0.3
RAB40B-207ENST00000572603 RAB32Q13637 225 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 DPF1Q92782 380 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 SMIM8Q96KF7 97 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 ATP6V0BQ99437 205 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 NMES1Q9C002 83 aa16.94■□□□□ 0.3
RAB40B-207ENST00000572603 NOTCH3Q9UM47 2321 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 LY86O95711 162 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 CXCL3P19876 107 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 FCN2Q15485 313 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 MLANAQ16655 118 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 WFDC9Q8NEX5 89 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 ZNF414Q96IQ9 312 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 RAB40CQ96S21 281 aa16.93■□□□□ 0.3
RAB40B-207ENST00000572603 LSM5Q9Y4Y9 91 aaKnown RBP16.93■□□□□ 0.3
RAB40B-207ENST00000572603 PRSS46E5RG02 174 aa16.92■□□□□ 0.3
RAB40B-207ENST00000572603 ARL3P36405 182 aa16.92■□□□□ 0.3
RAB40B-207ENST00000572603 OPRK1P41145 380 aa16.92■□□□□ 0.3
RAB40B-207ENST00000572603 TAS2R30P59541 319 aa16.92■□□□□ 0.3
RAB40B-207ENST00000572603 NOXA1Q86UR1 476 aa16.92■□□□□ 0.3
RAB40B-207ENST00000572603 OR11H7Q8NGC8 314 aa16.92■□□□□ 0.3
RAB40B-207ENST00000572603 DLX4Q92988 240 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms