RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 UBAC2Q8NBM4 344 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 UXS1Q8NBZ7 420 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 ZNF114Q8NC26 417 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 S100ZQ8WXG8 99 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 PINX1Q96BK5 328 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 RRNAD1Q96FB5 475 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 GALNT14Q96FL9 552 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 PLEKHA3Q9HB20 300 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 MRPL36Q9P0J6 103 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 MLXQ9UH92 298 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 TMEM56-RWDD3S4R434 201 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 HUWE1Q7Z6Z7 4374 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 A0A1B0GVG6 124 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 A8MWP6 167 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 INS-IGF2F8WCM5 200 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 ZNF207O43670 478 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 ATG12O94817 140 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 CTSGP08311 255 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 CD7P09564 240 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 C8orf88P0DMB2 117 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 IGHV4-30-4P0DP06 118 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 AARDQ4LEZ3 155 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 Q56UQ5 140 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 PVRIGQ6DKI7 326 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 LYZL2Q7Z4W2 148 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 SLC35G3Q8N808 338 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 OR1L6Q8NGR2 347 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 RNASE11Q8TAA1 199 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 DYNLRB2Q8TF09 96 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 WDR89Q96FK6 387 aaPredicted RBP7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 C19orf73Q9NVV2 129 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 KCNIP3Q9Y2W7 256 aa7.71□□□□□ -1.18
GTF3C1-213ENST00000571886 LINC00854A0A1B0GVQ3 168 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 CYB5BO43169 146 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 FAUP35544 74 aaKnown RBP7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 HOXA1P49639 335 aaPredicted RBP7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 CCR6P51684 374 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 MFAP4P55083 255 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 SPCS3P61009 180 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 ZNF846Q147U1 533 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 BSXQ3C1V8 233 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 SPANXN2Q5MJ10 180 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 ZNF57Q68EA5 555 aaPredicted RBP7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 LCN12Q6JVE5 192 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 BTNL8Q6UX41 500 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 TMED4Q7Z7H5 227 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 FAM219AQ8IW50 185 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 TMEM170AQ8WVE7 144 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 BSCL2Q96G97 398 aaPredicted RBP7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 SCGB3A2Q96PL1 93 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 WFDC10AQ9H1F0 79 aa7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.7□□□□□ -1.18
GTF3C1-213ENST00000571886 NDUFA4O00483 81 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 SCAF4O95104 1147 aaKnown RBP7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 AP3S2P59780 193 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 GUCA2BQ16661 112 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 ANKRD55Q3KP44 614 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 NMSQ5H8A3 153 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 SPSB3Q6PJ21 355 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 OR2K2Q8NGT1 345 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 OR52E5Q8NH55 327 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 TMEM190Q8WZ59 177 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 IL22RA2Q969J5 263 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 PDCD10Q9BUL8 212 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 WDR12Q9GZL7 423 aaKnown RBP7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 TECRQ9NZ01 308 aaKnown RBP7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 FLVCR2Q9UPI3 526 aa7.69□□□□□ -1.18
GTF3C1-213ENST00000571886 A8MZ25 164 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 TMEM50AO95807 157 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 NHLRC4P0CG21 123 aaPredicted RBP7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 FCGR2BP31994 310 aaPredicted RBP7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 BTCP35070 178 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 SNCAP37840 140 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 CD81P60033 236 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 PPP1R1AQ13522 171 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 TMEM128Q5BJH2 165 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 LGI3Q8N145 548 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 DEFB125Q8N687 156 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 ATP6V0BQ99437 205 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 TXN2Q99757 166 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 NEURL2Q9BR09 285 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 C20orf24Q9BUV8 137 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 ENY2Q9NPA8 101 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 MRPL27Q9P0M9 148 aaKnown RBP7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 UFC1Q9Y3C8 167 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 U3KQK5 164 aa7.68□□□□□ -1.18
GTF3C1-213ENST00000571886 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 A0A0B4J2A0 478 aa7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 RBMY1BA6NDE4 496 aaKnown RBP7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 RBMY1EA6NEQ0 496 aaKnown RBP7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 CEBPZOSA8MTT3 80 aa7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 PLA2G10O15496 165 aa7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 NUPL2O15504 423 aaKnown RBP7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 GNG7O60262 68 aa7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 SFT2D2O95562 160 aa7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 RBMY1DP0C7P1 496 aaKnown RBP7.67□□□□□ -1.18
GTF3C1-213ENST00000571886 SULT1A3P0DMM9 295 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms