RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 CD74P04233 296 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 CTSDP07339 412 aaPredicted RBP10.24□□□□□ -0.77
RAB40B-204ENST00000571554 TBPP20226 339 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 ETV6P41212 452 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 TFPI2P48307 235 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 MFAP4P55083 255 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 ERHP84090 104 aaKnown RBP10.24□□□□□ -0.77
RAB40B-204ENST00000571554 ZNF114Q8NC26 417 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 TERB2Q8NHR7 220 aa10.24□□□□□ -0.77
RAB40B-204ENST00000571554 RNASE11Q8TAA1 199 aaKnown RBP10.24□□□□□ -0.77
RAB40B-204ENST00000571554 SPAG8Q99932 426 aaPredicted RBP10.24□□□□□ -0.77
RAB40B-204ENST00000571554 LYSTQ99698 3801 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 LCE6AA0A183 80 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 GABARAPH6UMI1 98 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 TSPAN4O14817 238 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 GNG7O60262 68 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 P0C879 139 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 HOXA1P49639 335 aaPredicted RBP10.23□□□□□ -0.77
RAB40B-204ENST00000571554 RELQ04864 619 aaPredicted RBP10.23□□□□□ -0.77
RAB40B-204ENST00000571554 IL18Q14116 193 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 LAMTOR1Q6IAA8 161 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 CCDC71LQ8N9Z2 235 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 ZFAND1Q8TCF1 268 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 RNF2Q99496 336 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 SMPXQ9UHP9 88 aa10.23□□□□□ -0.77
RAB40B-204ENST00000571554 IGHV7-4-1A0A0J9YVY3 117 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 K7EMT4 169 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 CHEK1O14757 476 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 OR5AC1P0C628 307 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
RAB40B-204ENST00000571554 SNCAP37840 140 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 ZNF124Q15973 351 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 TMEM116Q8NCL8 245 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 OR4C16Q8NGL9 310 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 LHFPL5Q8TAF8 219 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 C15orf40Q8WUR7 153 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 SMIM4Q8WVI0 70 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 DIRAS2Q96HU8 199 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 ATP6V0BQ99437 205 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 OVOL2Q9BRP0 275 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 PDCD10Q9BUL8 212 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 RHPN1-AS1Q9BWJ2 59 aa10.22□□□□□ -0.77
RAB40B-204ENST00000571554 C6orf62Q9GZU0 229 aaPredicted RBP10.22□□□□□ -0.77
RAB40B-204ENST00000571554 NXF2Q9GZY0 626 aaKnown RBP10.22□□□□□ -0.77
RAB40B-204ENST00000571554 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 TEX13DA0A0J9YY54 714 aaPredicted RBP10.21□□□□□ -0.77
RAB40B-204ENST00000571554 NXPH3O95157 252 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 RNASE2P10153 161 aaKnown RBP10.21□□□□□ -0.77
RAB40B-204ENST00000571554 UCP1P25874 307 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 DEFB135Q30KP9 77 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 Q6ZRM9 215 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 APRG1Q8IVJ8 170 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 DYNC2LI1Q8TCX1 351 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 RRNAD1Q96FB5 475 aaKnown RBP10.21□□□□□ -0.77
RAB40B-204ENST00000571554 TXN2Q99757 166 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
RAB40B-204ENST00000571554 PRR13Q9NZ81 148 aa10.21□□□□□ -0.77
RAB40B-204ENST00000571554 CCDC59Q9P031 241 aaKnown RBP10.21□□□□□ -0.77
RAB40B-204ENST00000571554 C14orf166Q9Y224 244 aaKnown RBP10.21□□□□□ -0.77
RAB40B-204ENST00000571554 DNAH1Q9P2D7 4330 aa10.21□□□□□ -0.78
RAB40B-204ENST00000571554 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 OR4C46A6NHA9 309 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 DISC1C4P0D8 188 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 ATG12O94817 140 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 APOHP02749 345 aaPredicted RBP10.2□□□□□ -0.78
RAB40B-204ENST00000571554 AKAIN1P0CW23 69 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 FCGR2BP31994 310 aaPredicted RBP10.2□□□□□ -0.78
RAB40B-204ENST00000571554 MEF2DQ14814 521 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 MLANAQ16655 118 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 TOMM20LQ6UXN7 152 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 DUSP18Q8NEJ0 188 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 RAB2BQ8WUD1 216 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 OR10C1Q96KK4 312 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 NAA60Q9H7X0 242 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 ENY2Q9NPA8 101 aa10.2□□□□□ -0.78
RAB40B-204ENST00000571554 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
RAB40B-204ENST00000571554 MRPS10P82664 201 aaKnown RBP10.19□□□□□ -0.78
RAB40B-204ENST00000571554 SSBP1Q04837 148 aaKnown RBP10.19□□□□□ -0.78
RAB40B-204ENST00000571554 WFDC3Q8IUB2 231 aa10.19□□□□□ -0.78
RAB40B-204ENST00000571554 SELENOHQ8IZQ5 122 aaKnown RBP10.19□□□□□ -0.78
RAB40B-204ENST00000571554 OR51S1Q8NGJ8 323 aa10.19□□□□□ -0.78
RAB40B-204ENST00000571554 GLYATL2Q8WU03 294 aa10.19□□□□□ -0.78
RAB40B-204ENST00000571554 ST8SIA2Q92186 375 aa10.19□□□□□ -0.78
RAB40B-204ENST00000571554 TMEM222Q9H0R3 208 aa10.19□□□□□ -0.78
RAB40B-204ENST00000571554 FNDC4Q9H6D8 234 aaPredicted RBP10.19□□□□□ -0.78
RAB40B-204ENST00000571554 PUS1Q9Y606 427 aaKnown RBP eCLIP10.19□□□□□ -0.78
RAB40B-204ENST00000571554 HYDINQ4G0P3 5121 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 A0A0J9YWU9 116 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 A0A1B0GU03 582 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 H3BMQ9 156 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 CDS2O95674 445 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 OPRK1P41145 380 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 NPBWR1P48145 328 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 SUB1P53999 127 aaKnown RBP eCLIP10.18□□□□□ -0.78
RAB40B-204ENST00000571554 APOC4P55056 127 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 TMBIM6P55061 237 aa10.18□□□□□ -0.78
RAB40B-204ENST00000571554 EWSR1Q01844 656 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms