RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ATG12O94817 140 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 MT-CO2P00403 227 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 CLEC3BP05452 202 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 CSN3P07498 182 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 SULT1A3P0DMM9 295 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 SULT1A4P0DMN0 295 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 HIST1H1BP16401 226 aaKnown RBP5.32□□□□□ -1.56
SMG6-209ENST00000571442 ADMP35318 185 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 HOXA1P49639 335 aaPredicted RBP5.32□□□□□ -1.56
SMG6-209ENST00000571442 SPCS3P61009 180 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 SMCO1Q147U7 214 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 ACSM6Q6P461 480 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 UNQ9165/PRO28630Q6UXU0 137 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 HSD17B13Q7Z5P4 300 aaPredicted RBP5.32□□□□□ -1.56
SMG6-209ENST00000571442 OR1P1Q8NH06 330 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 OR52E5Q8NH55 327 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 EEF1AKMT3Q96AZ1 226 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 MISP3Q96FF7 219 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 CHRDL1Q9BU40 450 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 RBKSQ9H477 322 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 HSPB7Q9UBY9 170 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 IGHV3OR16-8A0A075B7F1 116 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 A0A1B0GU03 582 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 FAM240BA0A1B0GVZ2 78 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 DUXBA0A1W2PPF3 345 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 OR2T8A6NH00 312 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 CEBPZOSA8MTT3 80 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 K7EIL1 84 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 DUS4LO95620 317 aaKnown RBP5.31□□□□□ -1.56
SMG6-209ENST00000571442 DHFRP00374 187 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 H2AFB2P0C5Z0 115 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 IAPPP10997 89 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 ANXA3P12429 323 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 ZP3P21754 424 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 ARL3P36405 182 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 SRPXP78539 464 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
SMG6-209ENST00000571442 TNFRSF9Q07011 255 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 RPEL1Q2QD12 228 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 C4orf46Q504U0 113 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 C9orf66Q5T8R8 295 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 NRARPQ7Z6K4 114 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 OR9G4Q8NGQ1 327 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 VN1R17PQ8TDU5 208 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 MITD1Q8WV92 249 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 CACNG8Q8WXS5 425 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 PINX1Q96BK5 328 aaKnown RBP5.31□□□□□ -1.56
SMG6-209ENST00000571442 OR10C1Q96KK4 312 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 PRR25Q96S07 402 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 MAGT1Q9H0U3 335 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 C21orf62Q9NYP8 219 aa5.31□□□□□ -1.56
SMG6-209ENST00000571442 HUWE1Q7Z6Z7 4374 aaKnown RBP5.3□□□□□ -1.56
SMG6-209ENST00000571442 TRBV7-1A0A0A6YYK4 115 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 TMEM213A2RRL7 107 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 IZUMO1RA6ND01 250 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 C15orf62A8K5M9 175 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 TGOLN2O43493 480 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 GGCTO75223 188 aaKnown RBP5.3□□□□□ -1.56
SMG6-209ENST00000571442 SAP30O75446 220 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 TMEM50AO95807 157 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 CTSGP08311 255 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 TM4SF20Q53R12 229 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 C2orf83Q53S99 150 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 UBAC2Q8NBM4 344 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 DUSP18Q8NEJ0 188 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 OR4D5Q8NGN0 318 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 OR1S1Q8NH92 325 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 DTD1Q8TEA8 209 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 WDR89Q96FK6 387 aaPredicted RBP5.3□□□□□ -1.56
SMG6-209ENST00000571442 CXorf58Q96LI9 332 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 OR4C12Q96R67 309 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 PDCD10Q9BUL8 212 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
SMG6-209ENST00000571442 ZNF436Q9C0F3 470 aaPredicted RBP5.3□□□□□ -1.56
SMG6-209ENST00000571442 TMED3Q9Y3Q3 217 aa5.3□□□□□ -1.56
SMG6-209ENST00000571442 SORL1Q92673 2214 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 C2orf70A6NJV1 201 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 ZNF207O43670 478 aaKnown RBP5.29□□□□□ -1.56
SMG6-209ENST00000571442 CCNKO75909 580 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 IGLV1-51P01701 117 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 SLC25A6P12236 298 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 FCGR2BP31994 310 aaPredicted RBP5.29□□□□□ -1.56
SMG6-209ENST00000571442 SNCAP37840 140 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 PAX9P55771 341 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 POLR2GP62487 172 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMG6-209ENST00000571442 ID3Q02535 119 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 Q56UQ5 140 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 MZT2BQ6NZ67 158 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 PLET1Q6UQ28 207 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 REC114Q7Z4M0 266 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 GPHB5Q86YW7 130 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 SLC24A4Q8NFF2 622 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 COQ8AQ8NI60 647 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 ENKURQ8TC29 256 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 ZNF431Q8TF32 576 aaPredicted RBP5.29□□□□□ -1.56
SMG6-209ENST00000571442 ENY2Q9NPA8 101 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 HEYLQ9NQ87 328 aaPredicted RBP5.29□□□□□ -1.56
SMG6-209ENST00000571442 THYN1Q9P016 225 aa5.29□□□□□ -1.56
SMG6-209ENST00000571442 PMS2P5A8MQ11 134 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 A8MWP6 167 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms