RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 DERL1Q9BUN8 251 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 IFI27L2Q9H2X8 130 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 REG1AP05451 166 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 OR9G9P0C7N8 305 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 RSPO1Q2MKA7 263 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 C20orf204Q6ZNR8 217 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 SCNM1Q9BWG6 230 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 NCOA6Q14686 2063 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 ZFHX2Q9C0A1 2572 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA4-201ENST00000571252 LILRA1O75019 489 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 DUTP33316 252 aaKnown RBP9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 TMEM97Q5BJF2 176 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 TMEM144Q7Z5S9 345 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 TIMP3P35625 211 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 EFNB3Q15768 340 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 BEND2Q8NDZ0 799 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 AGMATQ9BSE5 352 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 LAMA1P25391 3075 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 FOXF2Q12947 444 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 FOXL1Q12952 345 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 WDR82Q6UXN9 313 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 TRBV6-6A0A0A6YYG2 114 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 LYPD6Q86Y78 171 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 GGTLC1Q9BX51 225 aa9.28□□□□□ -0.92
PCDHGA4-201ENST00000571252 STAG3L2P0CL84 134 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 STAG3L3P0CL85 134 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 PAX9P55771 341 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 GFRA1P56159 465 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 TBR1Q16650 682 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 ACSF3Q4G176 576 aaPredicted RBP9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 MORN2Q502X0 79 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 TEX29Q8N6K0 151 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 SRSF12Q8WXF0 261 aaKnown RBP9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 NEU1Q99519 415 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 PRDM13Q9H4Q3 707 aa9.27□□□□□ -0.92
PCDHGA4-201ENST00000571252 EML5Q05BV3 1969 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 MOSP00540 346 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 HLA-DRB1P01911 266 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 GLRXP35754 106 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 HBBP68871 147 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 LINC00305Q7Z4B0 112 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 LAMTOR2Q9Y2Q5 125 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 YPEL1O60688 119 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 CD33P20138 364 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 UQCRFS1P47985 274 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 NMUP48645 174 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 NUTF2P61970 127 aaKnown RBP9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 KCNS1Q96KK3 526 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 YPEL2Q96QA6 119 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 UFC1Q9Y3C8 167 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 KBTBD11-OT1A0A1B0GTJ5 212 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 PEX7O00628 323 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 PFN1P07737 140 aaKnown RBP9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 KLRB1Q12918 225 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 C2orf88Q9BSF0 95 aa9.27□□□□□ -0.93
PCDHGA4-201ENST00000571252 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 RBFOX2O43251 390 aaKnown RBP eCLIP9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 ZNF585BQ52M93 769 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 OSR1Q8TAX0 266 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 TMEM30BQ3MIR4 351 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 PEAR1Q5VY43 1037 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 ZNF788Q6ZQV5 615 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 FAM216BQ8N7L0 139 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 TMEM131Q92545 1883 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 CYYR1Q96J86 154 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 RNF115Q9Y4L5 304 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 C15orf61A6NNL5 157 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 DNLZQ5SXM8 178 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 FDCSPQ8NFU4 85 aa9.26□□□□□ -0.93
PCDHGA4-201ENST00000571252 TNFSF13O75888 250 aa9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 TFPI2P48307 235 aa9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 HOXA4Q00056 320 aaPredicted RBP9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 ST6GALNAC3Q8NDV1 305 aa9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 IZUMO1RA6ND01 250 aa9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 NTN3O00634 580 aaPredicted RBP9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 ZNF324O75467 553 aaPredicted RBP9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 Q6P435 159 aa9.25□□□□□ -0.93
PCDHGA4-201ENST00000571252 CACNG8Q8WXS5 425 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms