RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 MRPL27Q9P0M9 148 aaKnown RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 GPR132Q9UNW8 380 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 UFC1Q9Y3C8 167 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 KMT2CQ8NEZ4 4911 aaKnown RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 TRAV25A0A0B4J276 109 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 TEX13DA0A0J9YY54 714 aaPredicted RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 CRYM-AS1A6NIL9 109 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 OR11H12B2RN74 326 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 C3orf84H3BNL1 204 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 NDUFA4O00483 81 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 NOL3O60936 208 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 IFNA17P01571 189 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 RNASE2P10153 161 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 FCGR2BP31994 310 aaPredicted RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 ETV6P41212 452 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 AKR1C2P52895 323 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 MFAP4P55083 255 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 ERHP84090 104 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 MLANAQ16655 118 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 SELENOHQ8IZQ5 122 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 SLC35G3Q8N808 338 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 OR51S1Q8NGJ8 323 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 OR52B4Q8NGK2 314 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 GLYATL2Q8WU03 294 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 TMEM230Q96A57 120 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 PINX1Q96BK5 328 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 GPR146Q96CH1 333 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 FAM110AQ9BQ89 295 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 SPATA25Q9BR10 227 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 C20orf24Q9BUV8 137 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 HIPK2Q9H2X6 1198 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 EDA2RQ9HAV5 297 aa4.04□□□□□ -1.76
CHD3-212ENST00000570758 DAZ1Q9NQZ3 744 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 MRPL36Q9P0J6 103 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 RSL24D1Q9UHA3 163 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 C14orf166Q9Y224 244 aaKnown RBP4.04□□□□□ -1.76
CHD3-212ENST00000570758 IGHV3-49A0A0A0MS15 119 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 FABP12A6NFH5 140 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 C15orf62A8K5M9 175 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 INS-IGF2F8WCM5 200 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 K7EMT4 169 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 CHEK1O14757 476 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 TSPAN4O14817 238 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 NUPL2O15504 423 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 B3GALNT1O75752 331 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 ATG12O94817 140 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 YIF1AO95070 293 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 CDS2O95674 445 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 HOXA1P49639 335 aaPredicted RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 DHODHQ02127 395 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 KLF9Q13886 244 aaPredicted RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 TMEM187Q14656 261 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 SURF2Q15527 256 aaPredicted RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 BSXQ3C1V8 233 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 AARDQ4LEZ3 155 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 CASC10Q5T4H9 136 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 TMEM268Q5VZI3 342 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 ZFAND6Q6FIF0 208 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 TOMM20LQ6UXN7 152 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RBPMS2Q6ZRY4 209 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 SLC16A13Q7RTY0 426 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RNASE11Q8TAA1 199 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 RBPMSQ93062 196 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 TRIM63Q969Q1 353 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RRNAD1Q96FB5 475 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 RNF2Q99496 336 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 TXN2Q99757 166 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 PRRT1Q99946 306 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RHPN1-AS1Q9BWJ2 59 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 TMEM222Q9H0R3 208 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RBM38Q9H0Z9 239 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 FNDC4Q9H6D8 234 aaPredicted RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 MCUBQ9NWR8 336 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 GAR1Q9NY12 217 aaKnown RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 RABL2AQ9UBK7 228 aaPredicted RBP4.03□□□□□ -1.76
CHD3-212ENST00000570758 CACNG5Q9UF02 275 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 UBQLN2Q9UHD9 624 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 SMPXQ9UHP9 88 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RABL2BQ9UNT1 228 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 V9GYH0 126 aa4.03□□□□□ -1.76
CHD3-212ENST00000570758 RYR3Q15413 4870 aa4.03□□□□□ -1.77
CHD3-212ENST00000570758 IGHV3OR16-13A0A075B7E8 117 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 LOC102724200A0A096LPH7 203 aaPredicted RBP4.02□□□□□ -1.77
CHD3-212ENST00000570758 IGHV3-74A0A0B4J1X5 117 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 IGHV7-4-1A0A0J9YVY3 117 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 CCDC160A6NGH7 325 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 GNG7O60262 68 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 NXPH3O95157 252 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 TMEM50AO95807 157 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 APOHP02749 345 aaPredicted RBP4.02□□□□□ -1.77
CHD3-212ENST00000570758 LYL1P12980 280 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 SNCAP37840 140 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 NPBWR1P48145 328 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 SPCS3P61009 180 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 SUPT4H1P63272 117 aaKnown RBP4.02□□□□□ -1.77
CHD3-212ENST00000570758 RELQ04864 619 aaPredicted RBP4.02□□□□□ -1.77
CHD3-212ENST00000570758 ZNF79Q15937 498 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 ANKRD55Q3KP44 614 aa4.02□□□□□ -1.77
CHD3-212ENST00000570758 ODF3L2Q3SX64 289 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms