RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 HES4Q9HCC6 221 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 KMT2EQ8IZD2 1858 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 TDGF1P13385 188 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 SPRY4Q9C004 299 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 IDI2-AS1Q9NZ38 188 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 PRNDQ9UKY0 176 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 CFAP47Q6ZTR5 3102 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
USP43-202ENST00000570475 MKRN2OSH3BPM6 223 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
USP43-202ENST00000570475 CSN3P07498 182 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 HNRNPA3P51991 378 aaKnown RBP12.57□□□□□ -0.4
USP43-202ENST00000570475 SPATA45Q537H7 98 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 KBTBD11-OT1A0A1B0GTJ5 212 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 APCSP02743 223 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 LEMD1Q68G75 181 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 P0C879 139 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 SAA1P0DJI8 122 aaPredicted RBP12.57□□□□□ -0.4
USP43-202ENST00000570475 C1orf194Q5T5A4 169 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 MRPL20Q9BYC9 149 aaKnown RBP12.57□□□□□ -0.4
USP43-202ENST00000570475 DYNLRB1Q9NP97 96 aa12.57□□□□□ -0.4
USP43-202ENST00000570475 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
USP43-202ENST00000570475 SLC25A17O43808 307 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
USP43-202ENST00000570475 HINT1P49773 126 aaPredicted RBP12.56□□□□□ -0.4
USP43-202ENST00000570475 TCTAP57738 103 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 ST6GALNAC6Q969X2 333 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 SAP30LQ9HAJ7 183 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 NRN1Q9NPD7 142 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 CD24P25063 80 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 PAFAH1B2P68402 229 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 MMDQ15546 238 aa12.56□□□□□ -0.4
USP43-202ENST00000570475 DAZAP1Q96EP5 407 aaKnown RBP12.56□□□□□ -0.4
USP43-202ENST00000570475 SRRM4A7MD48 611 aaKnown RBP12.55□□□□□ -0.4
USP43-202ENST00000570475 TYMSP04818 313 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 KIR2DS2P43631 304 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 ZNF71Q9NQZ8 489 aaPredicted RBP12.55□□□□□ -0.4
USP43-202ENST00000570475 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
USP43-202ENST00000570475 TCF21O43680 179 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 CD99P14209 185 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
USP43-202ENST00000570475 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 DMXL2Q8TDJ6 3036 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 TMEM265A0A087WTH1 108 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 M0R2Z0 102 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 WNT2P09544 360 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 C8orf88P0DMB2 117 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 C19orf35Q6ZS72 473 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 RCHY1Q96PM5 261 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 PAXXQ9BUH6 204 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 SLC25A10Q9UBX3 287 aaPredicted RBP12.55□□□□□ -0.4
USP43-202ENST00000570475 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
USP43-202ENST00000570475 hADV38S2A0JD32 116 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 NKX6-3A6NJ46 265 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 LOXL3P58215 753 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 PMCHL1Q16048 86 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 COA6Q5JTJ3 125 aaKnown RBP12.54□□□□□ -0.4
USP43-202ENST00000570475 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 FBXL7Q9UJT9 491 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
USP43-202ENST00000570475 ASCL2Q99929 193 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 RPL8P62917 257 aaKnown RBP12.54□□□□□ -0.4
USP43-202ENST00000570475 MORN5Q5VZ52 161 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 FAM168AQ92567 244 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 RAB1CQ92928 201 aa12.54□□□□□ -0.4
USP43-202ENST00000570475 TEX50A0A1B0GTY4 177 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 M0QZ24 198 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 DNAJC4Q9NNZ3 241 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 PCSK5Q92824 1860 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 DYSFO75923 2080 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 GGTLC3B5MD39 225 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 LGALS4P56470 323 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 TNXAQ16473 311 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 VWC2Q2TAL6 325 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 TMEM144Q7Z5S9 345 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 GSX1Q9H4S2 264 aaPredicted RBP12.53□□□□□ -0.4
USP43-202ENST00000570475 PGPA6NDG6 321 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 FTH1P19P0C7X4 201 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 COX7A1P24310 79 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 SSBP2P81877 361 aaPredicted RBP12.53□□□□□ -0.4
USP43-202ENST00000570475 DIAPH2-AS1Q14236 149 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 Q8N7P7 452 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
USP43-202ENST00000570475 C17orf58Q2M2W7 97 aa12.52□□□□□ -0.4
USP43-202ENST00000570475 WDR73Q6P4I2 378 aa12.52□□□□□ -0.4
USP43-202ENST00000570475 OR1L8Q8NGR8 309 aa12.52□□□□□ -0.4
USP43-202ENST00000570475 ADTRPQ96IZ2 230 aa12.52□□□□□ -0.4
USP43-202ENST00000570475 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.41
USP43-202ENST00000570475 ZNF474Q6S9Z5 364 aaPredicted RBP12.52□□□□□ -0.41
USP43-202ENST00000570475 TCF24Q7RTU0 167 aa12.52□□□□□ -0.41
USP43-202ENST00000570475 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 EIF4EBP1Q13541 118 aaPredicted RBP12.51□□□□□ -0.41
USP43-202ENST00000570475 MAJINQ3KP22 176 aa12.51□□□□□ -0.41
USP43-202ENST00000570475 Q6ZVH6 145 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms