RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RELQ04864 619 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-220ENST00000569827 TOMM20LQ6UXN7 152 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 TPRA1Q86W33 373 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 SPARTQ8N0X7 666 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 TSPAN14Q8NG11 270 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 MOB3AQ96BX8 217 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 DGCR14Q96DF8 476 aaKnown RBP8.76□□□□□ -1.01
CAPN3-220ENST00000569827 OR10C1Q96KK4 312 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 CMTM3Q96MX0 182 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 NXF2Q9GZY0 626 aaKnown RBP8.76□□□□□ -1.01
CAPN3-220ENST00000569827 RABAC1Q9UI14 185 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 CELA1Q9UNI1 258 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 SSR3Q9UNL2 185 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 IGHV4-4A0A075B6R2 117 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 ELOA3CA0A087WX78 387 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-220ENST00000569827 A0A1B0GVY2 172 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 GNG7O60262 68 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 EIF4EP06730 217 aaKnown RBP8.75□□□□□ -1.01
CAPN3-220ENST00000569827 HSPA13P48723 471 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 TMEM56Q96MV1 263 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 TMEM14BQ9NUH8 114 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 PRNDQ9UKY0 176 aa8.75□□□□□ -1.01
CAPN3-220ENST00000569827 A0A1B0GU03 582 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 IGKV1-39P01597 117 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 IGKV1D-39P04432 117 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 FGF2P09038 288 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 GABARAPL2P60520 117 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 STHQ8IWL8 128 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 STXBP6Q8NFX7 210 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 ATP6V0BQ99437 205 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
CAPN3-220ENST00000569827 PUS1Q9Y606 427 aaKnown RBP eCLIP8.74□□□□□ -1.01
CAPN3-220ENST00000569827 GPR31O00270 319 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 ZNF688P0C7X2 276 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 PPP5CP53041 499 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 PAFAH1B2P68402 229 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
CAPN3-220ENST00000569827 OR5H2Q8NGV7 314 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 MRGPRFQ96AM1 343 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 VSIRQ9H7M9 311 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 DIABLOQ9NR28 239 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 MRPL36Q9P0J6 103 aaKnown RBP8.73□□□□□ -1.01
CAPN3-220ENST00000569827 X6R8D5 127 aa8.73□□□□□ -1.01
CAPN3-220ENST00000569827 HLA-DMAP28067 261 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 HRH1P35367 487 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 CBX5P45973 191 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-220ENST00000569827 PRCDQ00LT1 54 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 ACTL10Q5JWF8 245 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 DHRS11Q6UWP2 260 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 TBC1D26Q86UD7 250 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 OR4A16Q8NH70 328 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 SEC22AQ96IW7 307 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 GINS3Q9BRX5 216 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
CAPN3-220ENST00000569827 A0A0A6YYH2 397 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 TRAV10A0A0B4J240 114 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 PRSS29PA6NIE9 313 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 A6NJ64 397 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 C11orf94C9JXX5 98 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 RTL8CO15255 209 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 TCTAP57738 103 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 TAS2R20P59543 309 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 NEDD8Q15843 81 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 MLANAQ16655 118 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 CMTM1Q8IZ96 169 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 ZNF114Q8NC26 417 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 BORCS5Q969J3 196 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 TXN2Q99757 166 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 FKBP11Q9NYL4 201 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 ANAPC10Q9UM13 185 aa8.71□□□□□ -1.02
CAPN3-220ENST00000569827 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 K7EQG2 157 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 SCAND1P57086 179 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 C12orf74Q32Q52 190 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 TMEM69Q5SWH9 247 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 ZNF600Q6ZNG1 722 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 LYSMD2Q8IV50 215 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 OR6F1Q8NGZ6 308 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 TSC22D3Q99576 134 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 VCX3BQ9H321 246 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 HRH4Q9H3N8 390 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 RAB26Q9ULW5 256 aa8.7□□□□□ -1.02
CAPN3-220ENST00000569827 IGLV2-18A0A075B6J9 118 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 DEFB131BA0A096LNP1 70 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 ZNF705EA8MWA4 302 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-220ENST00000569827 TMEM50AO95807 157 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 MIFP14174 115 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 PI3P19957 117 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 P2RY1P47900 373 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 TAS2R46P59540 309 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 HSPE1P61604 102 aaKnown RBP8.69□□□□□ -1.02
CAPN3-220ENST00000569827 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
CAPN3-220ENST00000569827 UBE2NLQ5JXB2 153 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 PVRIGQ6DKI7 326 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 GSG1LQ6UXU4 331 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
CAPN3-220ENST00000569827 SAMD12Q8N8I0 201 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms