RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TMED4Q7Z7H5 227 aa10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 OR2K2Q8NGT1 345 aa10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 MISP3Q96FF7 219 aa10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 SDHCQ99643 169 aaPredicted RBP10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 GAR1Q9NY12 217 aaKnown RBP10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 CACNG5Q9UF02 275 aa10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 SMAD5-AS1Q9Y6J3 95 aa10.49□□□□□ -0.73
HERPUD1-218ENST00000569569 A0A0B4J2A0 478 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 A8MWP6 167 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 I3L2K1 104 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 FOLR2P14207 255 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 HOXA1P49639 335 aaPredicted RBP10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 MFAP4P55083 255 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 RBMS2Q15434 407 aaKnown RBP10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 Q56UQ5 140 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 LGI3Q8N145 548 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 TXN2Q99757 166 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 ZNF436Q9C0F3 470 aaPredicted RBP10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 PALMDQ9NP74 551 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 PRR13Q9NZ81 148 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 CACFD1Q9UGQ2 172 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 SHPKQ9UHJ6 478 aa10.48□□□□□ -0.73
HERPUD1-218ENST00000569569 IGHV3-35A0A0C4DH35 117 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 CENPXA8MT69 81 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 MT-CO2P00403 227 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 SULT1A3P0DMM9 295 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 SULT1A4P0DMN0 295 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 CBLN1P23435 193 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 ELLP55199 621 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 DEFB114Q30KQ6 69 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 LYZL2Q7Z4W2 148 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 UBAC2Q8NBM4 344 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 COL7A1Q02388 2944 aa10.47□□□□□ -0.73
HERPUD1-218ENST00000569569 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 TMEM213A2RRL7 107 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 CORTO00230 105 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 RNASE2P10153 161 aaKnown RBP10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 EDN2P20800 178 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 CCR6P51684 374 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 PVRIGQ6DKI7 326 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 CENPSQ8N2Z9 138 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 MARC2Q969Z3 335 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 C7orf50Q9BRJ6 194 aaKnown RBP10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 CHRDL1Q9BU40 450 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 UFC1Q9Y3C8 167 aa10.46□□□□□ -0.73
HERPUD1-218ENST00000569569 LINC00854A0A1B0GVQ3 168 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 A6NHS1 94 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 NDUFA4O00483 81 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 NUPL2O15504 423 aaKnown RBP10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 SFT2D2O95562 160 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 CTSGP08311 255 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 IL7P13232 177 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 VAMP1P23763 118 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 ADMP35318 185 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 HTR2BP41595 481 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 UBE2MP61081 183 aaKnown RBP10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 SMCO1Q147U7 214 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 BSXQ3C1V8 233 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 TM4SF20Q53R12 229 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 NMSQ5H8A3 153 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 Q8N1Y9 231 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 UXS1Q8NBZ7 420 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 DUSP18Q8NEJ0 188 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 HEYLQ9NQ87 328 aaPredicted RBP10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 MRPL27Q9P0M9 148 aaKnown RBP10.45□□□□□ -0.74
HERPUD1-218ENST00000569569 A0A1B0GU03 582 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 CEBPZOSA8MTT3 80 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 GNG7O60262 68 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 NDUFB6O95139 128 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 IGHV3-48P01763 117 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 C8orf88P0DMB2 117 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 NPBWR1P48145 328 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 RELQ04864 619 aaPredicted RBP10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 PPP1R1AQ13522 171 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 CACNG8Q8WXS5 425 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 HIPK2Q9H2X6 1198 aa10.44□□□□□ -0.74
HERPUD1-218ENST00000569569 ZNF785A8K8V0 405 aa10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 CNPY1Q3B7I2 92 aa10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 ANKRD55Q3KP44 614 aa10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 GTSCR1Q86UQ5 136 aa10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 DAZ1Q9NQZ3 744 aaKnown RBP10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 HSPB7Q9UBY9 170 aa10.43□□□□□ -0.74
HERPUD1-218ENST00000569569 A8MZ25 164 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 K7EMT4 169 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms