RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 OR10G7Q8NGN6 311 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 HIF1ANQ9NWT6 349 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 IGKV1OR2-108A0A075B7D4 117 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 YIF1AO95070 293 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 ADCYAP1P18509 176 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 OR1P1Q8NH06 330 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 KCNIP2Q9NS61 270 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 PXMP4Q9Y6I8 212 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 APELAP0DMC3 54 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 GATA3P23771 443 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 MIC13Q5XKP0 118 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 C7orf69Q9H7B7 122 aa17.91■□□□□ 0.46
VCPKMT-205ENST00000569518 IGHV3OR16-10A0A075B7F0 116 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 CNIH1O95406 144 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 LOXL1Q08397 574 aaPredicted RBP17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 ACOT6Q3I5F7 207 aaPredicted RBP17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 C10orf91Q5T1B1 145 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 LCN15Q6UWW0 184 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 C19orf35Q6ZS72 473 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 CCDC28AQ8IWP9 274 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 SSMEM1Q8WWF3 244 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 MBD6Q96DN6 1003 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 PBDC1Q9BVG4 233 aa17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 F11RQ9Y624 299 aaKnown RBP17.9■□□□□ 0.46
VCPKMT-205ENST00000569518 CTXND1A0A1B0GTU2 59 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 MAP1LC3B2A6NCE7 125 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 SEC14L6B5MCN3 397 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 IGHV4-38-2P0DP08 117 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 RPL29P47914 159 aaKnown RBP17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 RAB31Q13636 194 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 FXYD3Q14802 87 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 GCSAMLQ5JQS6 135 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 LINC01356Q8N9X3 169 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 MAP1LC3BQ9GZQ8 125 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 SLC25A22Q9H936 323 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 DMRT1Q9Y5R6 373 aa17.89■□□□□ 0.45
VCPKMT-205ENST00000569518 NCBP2LA6PVI3 153 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 CRYGCP07315 174 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 PRR20EP86478 221 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 PRR20CP86479 221 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 PRR20DP86480 221 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 PRR20BP86481 221 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 PRR20AP86496 221 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 ZNF562Q6V9R5 426 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 BRD3OSQ6XYD6 125 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 STPG3Q8N7X2 389 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 OR2T6Q8NHC8 308 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 SLC35E1Q96K37 410 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 ACTR3CQ9C0K3 210 aaPredicted RBP17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 SLC45A2Q9UMX9 530 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 PEA15Q15121 130 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 Q5PR19 223 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 Q8N9W7 124 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 EIF5A2Q9GZV4 153 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 SLC39A9Q9NUM3 307 aa17.88■□□□□ 0.45
VCPKMT-205ENST00000569518 SVEP1Q4LDE5 3571 aa17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 FGF8P55075 233 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 B2MP61769 119 aa17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 CX3CL1P78423 397 aa17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 FAM122CQ6P4D5 195 aa17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 RAB24Q969Q5 203 aa17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 C1RLQ9NZP8 487 aa17.87■□□□□ 0.45
VCPKMT-205ENST00000569518 RBFOX3A6NFN3 312 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 EIF3GO75821 320 aaKnown RBP eCLIP17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 SFTA3P0C7M3 94 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 LINC00869P0C866 280 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 DEFA4P12838 97 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 NDPQ00604 133 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 HIST2H2BCQ6DN03 193 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 RARRES2Q99969 163 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 MRPL36Q9P0J6 103 aaKnown RBP17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 CARHSP1Q9Y2V2 147 aaKnown RBP17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 A0A0U1RQK1 487 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 CORTO00230 105 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 CYB5BO43169 146 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 AVPP01185 164 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 CTRB1P17538 263 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 KLF17Q5JT82 389 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 CTRB2Q6GPI1 263 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 KRTAP1-3Q8IUG1 177 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 ARPC1AQ92747 370 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 MISP3Q96FF7 219 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 ACY3Q96HD9 319 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 SEC11CQ9BY50 192 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 MEGF9Q9H1U4 602 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 SMDT1Q9H4I9 107 aa17.86■□□□□ 0.45
VCPKMT-205ENST00000569518 CR1P17927 2039 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 RNF223E7ERA6 249 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 APOC3P02656 99 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 OR10J1P30954 320 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 CDC34P49427 236 aaPredicted RBP17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 PMS2P11Q13670 270 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 ZNF506Q5JVG8 444 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 ABHD5Q8WTS1 349 aa17.85■□□□□ 0.45
VCPKMT-205ENST00000569518 HLA-DRB1P01911 266 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 ETFRF1Q6IPR1 90 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 THAP8Q8NA92 274 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 PIFOQ8TCI5 191 aa17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 FAM103A1Q9BTL3 118 aaKnown RBP17.84■□□□□ 0.45
VCPKMT-205ENST00000569518 F8W036 122 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms