RNA–Protein interactions for RNA: ENST00000569390.1

NEIL1-222, Transcript of nei like DNA glycosylase 1, human

TSL 3

Gene NEIL1, Length 346 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-222	ENST00000569390		I3L2K1	104 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	SCAF4	O95104	1147 aa	Known RBP	14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	CTSG	P08311	255 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	ADM	P35318	185 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	SNCA	P37840	140 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	CASC10	Q5T4H9	136 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	FAM219A	Q8IW50	185 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	PRRT1	Q99946	306 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	C6orf62	Q9GZU0	229 aa	Predicted RBP	14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	EDA2R	Q9HAV5	297 aa		14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390	RSL24D1	Q9UHA3	163 aa	Known RBP	14.04	□□□□□ -0.16
NEIL1-222	ENST00000569390		A0A0B4J293	547 aa		14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	IFNA17	P01571	189 aa		14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	SUB1	P53999	127 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	RNASE11	Q8TAA1	199 aa	Known RBP	14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	C20orf24	Q9BUV8	137 aa		14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	TMEM222	Q9H0R3	208 aa		14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	HIPK2	Q9H2X6	1198 aa		14.03	□□□□□ -0.16
NEIL1-222	ENST00000569390	RBMY1B	A6NDE4	496 aa	Known RBP	14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	RBMY1E	A6NEQ0	496 aa	Known RBP	14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390		H3BMQ9	156 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	CORT	O00230	105 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	TSPAN4	O14817	238 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	ST8SIA3	O43173	380 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	GSTZ1	O43708	216 aa	Predicted RBP	14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	MT-CO2	P00403	227 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	RBMY1D	P0C7P1	496 aa	Known RBP	14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	IZUMO4	Q1ZYL8	232 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	SP6	Q3SY56	376 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	OR4C16	Q8NGL9	310 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	WFDC10A	Q9H1F0	79 aa		14.02	□□□□□ -0.17
NEIL1-222	ENST00000569390	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	GNG7	O60262	68 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	CDS2	O95674	445 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	NPBWR1	P48145	328 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	DHODH	Q02127	395 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	FAAP20	Q6NZ36	180 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	PINX1	Q96BK5	328 aa	Known RBP	14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	SCGB3A2	Q96PL1	93 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	RTBDN	Q9BSG5	229 aa	Predicted RBP	14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	SLIRP	Q9GZT3	109 aa	Known RBP	14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	NXF2	Q9GZY0	626 aa	Known RBP	14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	NAA60	Q9H7X0	242 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	ENY2	Q9NPA8	101 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	SELENOK	Q9Y6D0	94 aa		14.01	□□□□□ -0.17
NEIL1-222	ENST00000569390	ANKRD20A5P	A0PJZ0	165 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	OR5AC1	P0C628	307 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	HOXA1	P49639	335 aa	Predicted RBP	14	□□□□□ -0.17
NEIL1-222	ENST00000569390	DUSP18	Q8NEJ0	188 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	GLYATL2	Q8WU03	294 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	RBPMS	Q93062	196 aa	Known RBP	14	□□□□□ -0.17
NEIL1-222	ENST00000569390	OR10C1	Q96KK4	312 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	SCP2D1	Q9UJQ7	156 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	GPR132	Q9UNW8	380 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	DNAH7	Q8WXX0	4024 aa		14	□□□□□ -0.17
NEIL1-222	ENST00000569390	OR4C46	A6NHA9	309 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	YIF1A	O95070	293 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	BMI1	P35226	326 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	AARD	Q4LEZ3	155 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	SPINK9	Q5DT21	86 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	PVRIG	Q6DKI7	326 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	OR51S1	Q8NGJ8	323 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	OR52E5	Q8NH55	327 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	MCFD2	Q8NI22	146 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	FAM110A	Q9BQ89	295 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	GINS3	Q9BRX5	216 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	GGTLC1	Q9BX51	225 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	CACFD1	Q9UGQ2	172 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	SMPX	Q9UHP9	88 aa		13.99	□□□□□ -0.17
NEIL1-222	ENST00000569390	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	FABP12	A6NFH5	140 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	CRYM-AS1	A6NIL9	109 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	TNFSF8	P32971	234 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	ETV6	P41212	452 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	SPCS3	P61009	180 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	IL17D	Q8TAD2	202 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	SOST	Q9BQB4	213 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390	KCNIP3	Q9Y2W7	256 aa		13.98	□□□□□ -0.17
NEIL1-222	ENST00000569390		A0A0G2JRQ6	117 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	IGHV7-4-1	A0A0J9YVY3	117 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	SCGB2A1	O75556	95 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	CD5	P06127	495 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	RNASE2	P10153	161 aa	Known RBP	13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	TMEM116	Q8NCL8	245 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	IL22RA2	Q969J5	263 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	RHPN1-AS1	Q9BWJ2	59 aa		13.97	□□□□□ -0.17
NEIL1-222	ENST00000569390	IGHV3OR16-8	A0A075B7F1	116 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	TRAV14DV4	A0A0A6YYC5	116 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	ZNF207	O43670	478 aa	Known RBP	13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	FAU	P35544	74 aa	Known RBP	13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	TMEM268	Q5VZI3	342 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	ZNF600	Q6ZNG1	722 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	SELENOH	Q8IZQ5	122 aa	Known RBP	13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	GALNT14	Q96FL9	552 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	RETN	Q9HD89	108 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	TMEM56-RWDD3	S4R434	201 aa		13.96	□□□□□ -0.17
NEIL1-222	ENST00000569390	PIGBOS1	A0A0B4J2F0	54 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	CHEK1	O14757	476 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	IGHV3-48	P01763	117 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms