RNA–Protein interactions for RNA: ENST00000569338.5

BBS4-217, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-217ENST00000569338 PDE6DO43924 150 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 CXCL13O43927 109 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 SS18L1O75177 396 aaPredicted RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 GGCTO75223 188 aaKnown RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 MPDU1O75352 247 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 CST7O76096 145 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 TSPAN13O95857 204 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 HRASP01112 189 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 TRGC2P03986 189 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 PFN1P07737 140 aaKnown RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 SOD3P08294 240 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 CCL3P10147 92 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 COX6A1P12074 109 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 RAB4AP20338 218 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 OMGP23515 440 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 HOXA6P31267 233 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 UQCRFS1P47985 274 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 GNG3P63215 75 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 CCL20P78556 96 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 RPL19P84098 196 aaKnown RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 MEF2BQ02080 365 aaPredicted RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 CATR1Q13166 79 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 ZNF146Q15072 292 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 TGIF1Q15583 401 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 IQCJQ1A5X6 159 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 CEACAM16Q2WEN9 425 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 BSXQ3C1V8 233 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 TMEM14EPQ6UXP3 125 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 NUP37Q8NFH4 326 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 OR2Y1Q8NGV0 311 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 OR1P1Q8NH06 330 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 MRPL30Q8TCC3 161 aaKnown RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 NEK7Q8TDX7 302 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 RAB1CQ92928 201 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 GPR146Q96CH1 333 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 C14orf144Q96I85 54 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 SMIM7Q9BQ49 75 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 MCRIP2Q9BUT9 160 aaKnown RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 TMEM147Q9BVK8 224 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 SRXN1Q9BYN0 137 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 MAP1LC3BQ9GZQ8 125 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 TMEM9BQ9NQ34 198 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 CCL28Q9NRJ3 127 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 KCNIP2Q9NS61 270 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 RPRMQ9NS64 109 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 SLC39A9Q9NUM3 307 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 PSENENQ9NZ42 101 aa3.78□□□□□ -1.8
BBS4-217ENST00000569338 BOKQ9UMX3 212 aaPredicted RBP3.78□□□□□ -1.8
BBS4-217ENST00000569338 PRRC2BQ5JSZ5 2229 aaKnown RBP3.77□□□□□ -1.81
BBS4-217ENST00000569338 TGIF2-C20orf24A0A0A6YYL0 155 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 ZFP92A6NM28 416 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 CEBPZOSA8MTT3 80 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 J3QT63 122 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 M0QZK8 103 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 PHOX2AO14813 284 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 HMGB3O15347 200 aaKnown RBP3.77□□□□□ -1.81
BBS4-217ENST00000569338 ZNF737O75373 536 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 MRPL33O75394 65 aaKnown RBP3.77□□□□□ -1.81
BBS4-217ENST00000569338 CGAP01215 116 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 SCTP09683 121 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 STAG3L2P0CL84 134 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 FABP4P15090 132 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 KLK2P20151 261 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 COX5AP20674 150 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 BCL3P20749 454 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 IL2RGP31785 369 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 GALR1P47211 349 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 CEBPGP53567 150 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 SPCS3P61009 180 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 RUNX1Q01196 453 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 PLGLB1Q02325 96 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 ZFP36L1Q07352 338 aaKnown RBP3.77□□□□□ -1.81
BBS4-217ENST00000569338 SLC38A11Q08AI6 406 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 HERPUD1Q15011 391 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 IGFBP7Q16270 282 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 COX19Q49B96 90 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 ZNF343Q6P1L6 599 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 SPNS3Q6ZMD2 512 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 CALHM1Q8IU99 346 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 TPRX1Q8N7U7 411 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 ZNF709Q8N972 641 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 FRZBQ92765 325 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 TAF15Q92804 592 aaKnown RBP eCLIP3.77□□□□□ -1.81
BBS4-217ENST00000569338 RTL8AQ9BWD3 113 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 PARLQ9H300 379 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 OR51I2Q9H344 312 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 PPDPFQ9H3Y8 114 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 PROK2Q9HC23 129 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 KCNIP1Q9NZI2 227 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 B4GALT7Q9UBV7 327 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 PCNX3Q9H6A9 2034 aa3.77□□□□□ -1.81
BBS4-217ENST00000569338 EML6Q6ZMW3 1958 aa3.76□□□□□ -1.81
BBS4-217ENST00000569338 TDRD6O60522 2096 aaKnown RBP3.76□□□□□ -1.81
BBS4-217ENST00000569338 IGHV3-15A0A0B4J1V0 119 aa3.76□□□□□ -1.81
BBS4-217ENST00000569338 IGKV1D-13A0A0B4J2D9 117 aa3.76□□□□□ -1.81
BBS4-217ENST00000569338 A0A1B0GV50 99 aa3.76□□□□□ -1.81
BBS4-217ENST00000569338 TMEM210A6NLX4 147 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms