RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	IGF2	P01344	180 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	IGKV1-5	P01602	117 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	IGHG2	P01859	326 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	APOC1	P02654	83 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	MT-ND4L	P03901	98 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	RBP1	P09455	135 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	OR5AC1	P0C628	307 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	UBB	P0CG47	229 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF705D	P0CH99	300 aa	Predicted RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	SMIM10L2A	P0DMW4	78 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	SMIM10L2B	P0DMW5	78 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	GPX2	P18283	190 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	PPIB	P23284	216 aa	Known RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	CMPK1	P30085	196 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	S100A11	P31949	105 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	G6PC	P35575	357 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	CD200	P41217	278 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	EVX1	P49640	407 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	RAB5C	P51148	216 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	RAB13	P51153	203 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF80	P51504	273 aa	Predicted RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	CDC42	P60953	191 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	TBPL1	P62380	186 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	RPL30	P62888	115 aa	Known RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	HIST1H1A	Q02539	215 aa	Predicted RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	ENDOG	Q14249	297 aa	Known RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	MSMO1	Q15800	293 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	NDUFA5	Q16718	116 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	DEFB115	Q30KQ5	88 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	FKBP1C	Q5VVH2	108 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	RASL11A	Q6T310	242 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	TOMM20L	Q6UXN7	152 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	SPATA12	Q7Z6I5	190 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	AMN1	Q8IY45	258 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	FER1L6-AS1	Q8NA97	138 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	ZFP62	Q8NB50	900 aa	Predicted RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	OR5C1	Q8NGR4	320 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	STAG3L4	Q8TBR4	150 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	MRPL30	Q8TCC3	161 aa	Known RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF675	Q8TD23	568 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	SLC7A6	Q92536	515 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	PLEKHB2	Q96CS7	222 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	MS4A6E	Q96DS6	147 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	CAPZA3	Q96KX2	299 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	B9D2	Q9BPU9	175 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	HSPB9	Q9BQS6	159 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	LPAR5	Q9H1C0	372 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	OR2D2	Q9H210	308 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	EFCAB1	Q9HAE3	211 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	TPT1P8	Q9HAU6	139 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	POPDC3	Q9HBV1	291 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	TECPR2	O15040	1411 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	PTPRG	P23470	1445 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	UHRF1BP1	Q6BDS2	1440 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	YTHDC2	Q9H6S0	1430 aa	Known RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	SIGLEC1	Q9BZZ2	1709 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	KIF24	Q5T7B8	1368 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	IBTK	Q9P2D0	1353 aa	Predicted RBP	0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	MYO5B	Q9ULV0	1848 aa		0.94	□□□□□ -2.26
UBR1-209	ENST00000569243	ARAP1	Q96P48	1450 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	DSCAM	O60469	2012 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	NUP205	Q92621	2012 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	CEP170	Q5SW79	1584 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	VWDE	Q8N2E2	1590 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	RERE	Q9P2R6	1566 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	SPATA31E1	Q6ZUB1	1445 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TRBV19	A0A075B6N1	114 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	MEIKIN	A0A087WXM9	373 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	IGHV3-43	A0A0B4J1X8	118 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243		A0A0B4J2C4	111 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	LOC107984640	A0A0U1RRK4	108 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TRDV1	A0A1B0GX56	115 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	DUXB	A0A1W2PPF3	345 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	C19orf71	A6NCJ1	209 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	IZUMO1R	A6ND01	250 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	GGT3P	A6NGU5	568 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF860	A6NHJ4	632 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	MIF4GD	A9UHW6	222 aa	Known RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	IGLL5	B9A064	214 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243		C9JAW5	83 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243		C9JCJ5	164 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	BUB1B-PAK6	H3BSN5	160 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	GABARAP	H6UMI1	98 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243		K7ERS5	55 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	OR2T1	O43869	369 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	GNG7	O60262	68 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	PFDN1	O60925	122 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	TNFSF15	O95150	251 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	IFNA7	P01567	189 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	APOA2	P02652	100 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF25	P17030	456 aa	Predicted RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	NFYB	P25208	207 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	FKBP2	P26885	142 aa	Known RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	HLA-DMB	P28068	263 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	OPRM1	P35372	400 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	LPAR6	P43657	344 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	NUDT2	P50583	147 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	FGF12	P61328	243 aa		0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	RRAS2	P62070	204 aa	Predicted RBP	0.93	□□□□□ -2.26
UBR1-209	ENST00000569243	RHOG	P84095	191 aa		0.93	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms