RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 DEFB136Q30KP8 78 aa12.95□□□□□ -0.34
COMMD4-224ENST00000568877 C2orf83Q53S99 150 aa12.95□□□□□ -0.34
COMMD4-224ENST00000568877 VN1R17PQ8TDU5 208 aa12.95□□□□□ -0.34
COMMD4-224ENST00000568877 EEF1AKMT3Q96AZ1 226 aa12.95□□□□□ -0.34
COMMD4-224ENST00000568877 CXorf58Q96LI9 332 aa12.95□□□□□ -0.34
COMMD4-224ENST00000568877 MGAT4CQ9UBM8 478 aa12.95□□□□□ -0.34
COMMD4-224ENST00000568877 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 K7EIM0 57 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 CCL24O00175 119 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 CORTO00230 105 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 LY86O95711 162 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 TSPAN15O95858 294 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 MBPP02686 304 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-224ENST00000568877 NPY1RP25929 384 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 ATP5IP56385 69 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-224ENST00000568877 IL15RAQ13261 267 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 NOXA1Q86UR1 476 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 OR1N2Q8NGR9 330 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 RAX2Q96IS3 184 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 S4R3C0 116 aa12.94□□□□□ -0.34
COMMD4-224ENST00000568877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.93□□□□□ -0.34
COMMD4-224ENST00000568877 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 IGHV3-21A0A0B4J1V1 117 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 ANKRD34BA5PLL1 514 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 I3L2K1 104 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 SSSCA1O60232 199 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 MT-CO2P00403 227 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 HSPB1P04792 205 aaKnown RBP12.93□□□□□ -0.34
COMMD4-224ENST00000568877 MYCNOSP40205 109 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 H2BFSP57053 126 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 FAM209BQ5JX69 171 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 ETV3LQ6ZN32 361 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 OR11H1Q8NG94 326 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 SCARB1Q8WTV0 552 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
COMMD4-224ENST00000568877 DUX3Q96PT4 197 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 NMES1Q9C002 83 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 MED28Q9H204 178 aa12.93□□□□□ -0.34
COMMD4-224ENST00000568877 PEF1Q9UBV8 284 aaKnown RBP12.93□□□□□ -0.34
COMMD4-224ENST00000568877 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 A0A087WW49 117 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 K7EPK0 472 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
COMMD4-224ENST00000568877 CYCSP99999 105 aaKnown RBP12.92□□□□□ -0.34
COMMD4-224ENST00000568877 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 RNASEH2CQ8TDP1 164 aaKnown RBP12.92□□□□□ -0.34
COMMD4-224ENST00000568877 DPF1Q92782 380 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 SMIM8Q96KF7 97 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
COMMD4-224ENST00000568877 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-224ENST00000568877 RCL1Q9Y2P8 373 aaKnown RBP12.92□□□□□ -0.34
COMMD4-224ENST00000568877 TMEM50AO95807 157 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 TRBV12-3P01733 135 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 PF4P02776 101 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 PAX9P55771 341 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 ZNF616Q08AN1 781 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 RAB32Q13637 225 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 FHL3Q13643 280 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 FCN2Q15485 313 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 SPANXN5Q5MJ07 72 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 PSENENQ9NZ42 101 aa12.91□□□□□ -0.34
COMMD4-224ENST00000568877 LSM5Q9Y4Y9 91 aaKnown RBP12.91□□□□□ -0.34
COMMD4-224ENST00000568877 C15orf62A8K5M9 175 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 LINC01619G3V211 115 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 IFNA4P05014 189 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 CXCL3P19876 107 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 OPRK1P41145 380 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 TAS2R30P59541 319 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 S100A10P60903 97 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 RRAS2P62070 204 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-224ENST00000568877 RAB11AP62491 216 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 OR4C12Q96R67 309 aa12.9□□□□□ -0.34
COMMD4-224ENST00000568877 FNDC4Q9H6D8 234 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-224ENST00000568877 PAIP2BQ9ULR5 123 aaKnown RBP12.9□□□□□ -0.34
COMMD4-224ENST00000568877 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
COMMD4-224ENST00000568877 RPS10-NUDT3A0A1W2PQS6 291 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 H3BP45 60 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 L7N2F9 121 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 CLEC3BP05452 202 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 OR8U8P0C7N1 319 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 MFAP4P55083 255 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 VAMP2P63027 116 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 MLANAQ16655 118 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 PRR31Q5SQ13 230 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 OR11H7Q8NGC8 314 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-224ENST00000568877 ATP6V0BQ99437 205 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 TXN2Q99757 166 aa12.89□□□□□ -0.35
COMMD4-224ENST00000568877 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
COMMD4-224ENST00000568877 F8W735 103 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-224ENST00000568877 BMPR1BO00238 502 aa12.88□□□□□ -0.35
COMMD4-224ENST00000568877 TSC22D2O75157 780 aa12.88□□□□□ -0.35
COMMD4-224ENST00000568877 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-224ENST00000568877 ZP3P21754 424 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms