RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 FBXL15Q9H469 300 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 HEYLQ9NQ87 328 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 PARP11Q9NR21 331 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 NDUFA4L2Q9NRX3 87 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 FAM96BQ9Y3D0 163 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 FBXO7Q9Y3I1 522 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 AMMECR1Q9Y4X0 333 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 HILPDAQ9Y5L2 63 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 INSIG2Q9Y5U4 225 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 SOX21Q9Y651 276 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-210ENST00000567654 KPTNQ9Y664 436 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 LRRK2Q5S007 2527 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 POLQO75417 2590 aa4.56□□□□□ -1.68
SF3B3-210ENST00000567654 USP9YO00507 2555 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 IGHV3OR16-10A0A075B7F0 116 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 A0A096LNT2 108 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 hCG_1809904A0A1W2PP81 198 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 A0A1W2PPE2 198 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 A0A1W2PR64 198 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 A0A1W2PRV1 198 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 FCN1O00602 326 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 AGPAT2O15120 278 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 SCO1O75880 301 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 DFFBO76075 338 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 VENTXO95231 258 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 IFNA10P01566 189 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 REG1AP05451 166 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 OR8U8P0C7N1 319 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 APELAP0DMC3 54 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 PAX1P15863 534 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 FGF7P21781 194 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 USF1P22415 310 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 NPY1RP25929 384 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 HTR1DP28221 377 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 MC5RP33032 325 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 CAMLGP49069 296 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 RAB13P51153 203 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 MFAP2P55001 183 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 ELLP55199 621 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 RAB2AP61019 212 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 RPL8P62917 257 aaKnown RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 HBG1P69891 147 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 HBG2P69892 147 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 WT1-ASQ06250 92 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 SSX2Q16385 188 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 BSXQ3C1V8 233 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 FAM120AOSQ5T036 256 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 EIF4E3Q8N5X7 224 aaKnown RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 SLC24A4Q8NFF2 622 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 BPIFCQ8NFQ6 507 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 LRRC20Q8TCA0 184 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 SAT2Q96F10 170 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 CIB3Q96Q77 187 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 CLCC1Q96S66 551 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 TMEM147Q9BVK8 224 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 PARD6GQ9BYG4 376 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 PRDM13Q9H4Q3 707 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 PLEKHA3Q9HB20 300 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 RPRMQ9NS64 109 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
SF3B3-210ENST00000567654 DPM3Q9P2X0 92 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 PRNDQ9UKY0 176 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 WDR83OSQ9Y284 106 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF257Q9Y2Q1 563 aa4.55□□□□□ -1.68
SF3B3-210ENST00000567654 APCP25054 2843 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 CENPVL3A0A0U1RRI6 287 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 IGLC7A0M8Q6 106 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 TEX22C9J3V5 150 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 FOXH1O75593 365 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 IFNA5P01569 189 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 PRH1P02810 166 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 SNRNP70P08621 437 aaKnown RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 AREGP15514 252 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 ZP3P21754 424 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 PPIFP30405 207 aaKnown RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 PAX8Q06710 450 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 ZNF616Q08AN1 781 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 TNXAQ16473 311 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 PRSS8Q16651 343 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 GCSAMLQ5JQS6 135 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 EIF5AL1Q6IS14 154 aaKnown RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 SLC25A24Q6NUK1 477 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 CLEC2AQ6UVW9 174 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 C1orf122Q6ZSJ8 110 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 CENPVQ7Z7K6 275 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 Q8N6K4 173 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 TEX45Q8NA69 505 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 MAPK1IP1LQ8NDC0 245 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 OR10P1Q8NGE3 313 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 OR1L8Q8NGR8 309 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 OR4A5Q8NH83 315 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 MARC2Q969Z3 335 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 GNPNAT1Q96EK6 184 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 MGST2Q99735 147 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 PSMG3Q9BT73 122 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 NPCDR1Q9BY65 106 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 HIPK2Q9H2X6 1198 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 UQCC1Q9NVA1 299 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms