RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KIR2DL5BA0A0G2JN68 375 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 KIR2DL5BA0A0G2JPC4 375 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 ANKRD20A5PA0PJZ0 165 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 MEIS3P1A6NDR6 274 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 NUPR2A6NF83 97 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 OR2T8A6NH00 312 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 NUPL2O15504 423 aaKnown RBP13.91□□□□□ -0.18
LINC01238-205ENST00000567549 CD5P06127 495 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 NAT1P18440 290 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 EDN2P20800 178 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 FAUP35544 74 aaKnown RBP13.91□□□□□ -0.18
LINC01238-205ENST00000567549 KLF9Q13886 244 aaPredicted RBP13.91□□□□□ -0.18
LINC01238-205ENST00000567549 Q56UQ5 140 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 RNASE12Q5GAN4 147 aaKnown RBP13.91□□□□□ -0.18
LINC01238-205ENST00000567549 WFDC3Q8IUB2 231 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 KIR2DL5AQ8N109 375 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 STPG3Q8N7X2 389 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 OR10W1Q8NGF6 305 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 KIR2DL5BQ8NHK3 375 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 C20orf24Q9BUV8 137 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 ANAPC10Q9UM13 185 aa13.91□□□□□ -0.18
LINC01238-205ENST00000567549 C15orf62A8K5M9 175 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 PMP2P02689 132 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 WT1-ASQ06250 92 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 UBAC2Q8NBM4 344 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 OR1P1Q8NH06 330 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 TXN2Q99757 166 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 OVOL2Q9BRP0 275 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 COPZ2Q9P299 210 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 KLK11Q9UBX7 282 aa13.9□□□□□ -0.18
LINC01238-205ENST00000567549 DYNC2H1Q8NCM8 4307 aaKnown RBP13.89□□□□□ -0.19
LINC01238-205ENST00000567549 IGHV3-35A0A0C4DH35 117 aa13.89□□□□□ -0.19
LINC01238-205ENST00000567549 RPA2P15927 270 aa13.89□□□□□ -0.19
LINC01238-205ENST00000567549 ATF4P18848 351 aaPredicted RBP13.89□□□□□ -0.19
LINC01238-205ENST00000567549 G6PCP35575 357 aa13.89□□□□□ -0.19
LINC01238-205ENST00000567549 H2BFWTQ7Z2G1 175 aa13.89□□□□□ -0.19
LINC01238-205ENST00000567549 TMEM229BQ8NBD8 167 aa13.89□□□□□ -0.19
LINC01238-205ENST00000567549 OR4A16Q8NH70 328 aa13.89□□□□□ -0.19
LINC01238-205ENST00000567549 CXorf65A6NEN9 183 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 C15orf61A6NNL5 157 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 SPRY2O43597 315 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 ATG12O94817 140 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 RCVRNP35243 200 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 HRH1P35367 487 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 MFAP4P55083 255 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 SCARB1Q8WTV0 552 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 GALNT14Q96FL9 552 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 TMEM14BQ9NUH8 114 aa13.88□□□□□ -0.19
LINC01238-205ENST00000567549 SCGB2A1O75556 95 aa13.87□□□□□ -0.19
LINC01238-205ENST00000567549 AKAIN1P0CW23 69 aa13.87□□□□□ -0.19
LINC01238-205ENST00000567549 TAS2R19P59542 299 aa13.87□□□□□ -0.19
LINC01238-205ENST00000567549 PAFAH1B2P68402 229 aa13.87□□□□□ -0.19
LINC01238-205ENST00000567549 ERHP84090 104 aaKnown RBP13.87□□□□□ -0.19
LINC01238-205ENST00000567549 TNFRSF9Q07011 255 aa13.87□□□□□ -0.19
LINC01238-205ENST00000567549 GINS3Q9BRX5 216 aa13.87□□□□□ -0.19
LINC01238-205ENST00000567549 KLK5Q9Y337 293 aaPredicted RBP13.87□□□□□ -0.19
LINC01238-205ENST00000567549 hCG_2014768A0A024R1R8 64 aa13.86□□□□□ -0.19
LINC01238-205ENST00000567549 TBPP20226 339 aa13.86□□□□□ -0.19
LINC01238-205ENST00000567549 FCGR2BP31994 310 aaPredicted RBP13.86□□□□□ -0.19
LINC01238-205ENST00000567549 FXYD6Q9H0Q3 95 aa13.86□□□□□ -0.19
LINC01238-205ENST00000567549 SELENOKQ9Y6D0 94 aa13.86□□□□□ -0.19
LINC01238-205ENST00000567549 STARD9Q9P2P6 4700 aa13.86□□□□□ -0.19
LINC01238-205ENST00000567549 CSMD3Q7Z407 3707 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 HLA-DMAP28067 261 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 UCP3P55916 312 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 PHLDA2Q53GA4 152 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 STEAP1BQ6NZ63 245 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 ZNF114Q8NC26 417 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 MARVELD1Q9BSK0 173 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 NSG2Q9Y328 171 aa13.85□□□□□ -0.19
LINC01238-205ENST00000567549 K7EIM0 57 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 GNG7O60262 68 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 PFDN1O60925 122 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 YIF1AO95070 293 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 BCAP31P51572 246 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 MEF2DQ14814 521 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 LYG2Q86SG7 212 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 TBC1D26Q86UD7 250 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 TMEM116Q8NCL8 245 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 ZNF486Q96H40 463 aaPredicted RBP13.84□□□□□ -0.19
LINC01238-205ENST00000567549 CHRDL1Q9BU40 450 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 UBQLN2Q9UHD9 624 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 SMPXQ9UHP9 88 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
LINC01238-205ENST00000567549 CORTO00230 105 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 RAB3DO95716 219 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 CTSDP07339 412 aaPredicted RBP13.83□□□□□ -0.2
LINC01238-205ENST00000567549 SNCAP37840 140 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 NPBWR1P48145 328 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 SUB1P53999 127 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01238-205ENST00000567549 PRCDQ00LT1 54 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 DEFB135Q30KP9 77 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 PPP1R14BQ96C90 147 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 RNF183Q96D59 192 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 LYSTQ99698 3801 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 TMEM231Q9H6L2 316 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 MCUBQ9NWR8 336 aa13.83□□□□□ -0.2
LINC01238-205ENST00000567549 TRAV14DV4A0A0A6YYC5 116 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms