RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 DTD1Q8TEA8 209 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
SF3B3-208ENST00000567250 DUX3Q96PT4 197 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 CIB3Q96Q77 187 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-208ENST00000567250 ATP6V0BQ99437 205 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 GAR1Q9NY12 217 aaKnown RBP9.41□□□□□ -0.9
SF3B3-208ENST00000567250 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.4□□□□□ -0.9
SF3B3-208ENST00000567250 ANKRD34BA5PLL1 514 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 WRBO00258 174 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 PITX3O75364 302 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 ATP5IP56385 69 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-208ENST00000567250 UXS1Q8NBZ7 420 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 MISP3Q96FF7 219 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 RBKSQ9H477 322 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 U3KQ87 197 aa9.4□□□□□ -0.9
SF3B3-208ENST00000567250 MFSD2BA6NFX1 497 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 NDUFB8O95169 186 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 RNASE2P10153 161 aaKnown RBP9.39□□□□□ -0.91
SF3B3-208ENST00000567250 NPY1RP25929 384 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-208ENST00000567250 RPP30P78346 268 aaKnown RBP9.39□□□□□ -0.91
SF3B3-208ENST00000567250 TATDN3Q17R31 274 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 RGS21Q2M5E4 152 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 RPEL1Q2QD12 228 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 IAH1Q2TAA2 248 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-208ENST00000567250 BSXQ3C1V8 233 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 PINX1Q96BK5 328 aaKnown RBP9.39□□□□□ -0.91
SF3B3-208ENST00000567250 C21orf62Q9NYP8 219 aa9.39□□□□□ -0.91
SF3B3-208ENST00000567250 RPS10-NUDT3A0A1W2PQS6 291 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 FAM25EA8MYX2 175 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 SYNGR2O43760 224 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 IFNA10P01566 189 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-208ENST00000567250 ARL3P36405 182 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 OPRK1P41145 380 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 MFAP2P55001 183 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 C2orf83Q53S99 150 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 GSG1LQ6UXU4 331 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 ZBTB8BQ8NAP8 495 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-208ENST00000567250 WFDC9Q8NEX5 89 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 ZNF502Q8TBZ5 544 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 RNASEH2CQ8TDP1 164 aaKnown RBP9.38□□□□□ -0.91
SF3B3-208ENST00000567250 BSCL2Q96G97 398 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-208ENST00000567250 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 DMRT1Q9Y5R6 373 aa9.38□□□□□ -0.91
SF3B3-208ENST00000567250 MGAM2Q2M2H8 2515 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 K7EIM0 57 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 CCSO14618 274 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 OVOL1O14753 267 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 GGCTO75223 188 aaKnown RBP9.37□□□□□ -0.91
SF3B3-208ENST00000567250 SCGB1D2O95969 90 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 MT-CO2P00403 227 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 GPR183P32249 361 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 SLURP1P55000 103 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 Q56UQ5 140 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 ETFRF1Q6IPR1 90 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 SPSB3Q6PJ21 355 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 C1QL4Q86Z23 238 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 OR4D5Q8NGN0 318 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 SCARB1Q8WTV0 552 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 TXN2Q99757 166 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 S4R3C0 116 aa9.37□□□□□ -0.91
SF3B3-208ENST00000567250 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 MPTX1A8MV57 137 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 I3L2K1 104 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 BMPR1BO00238 502 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 TGOLN2O43493 480 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 SSNA1O43805 119 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 TRBV12-3P01733 135 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 IAPPP10997 89 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 SLC25A4P12235 298 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 FCGR2BP31994 310 aaPredicted RBP9.36□□□□□ -0.91
SF3B3-208ENST00000567250 NPBWR1P48145 328 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 MFAP4P55083 255 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 RAB11AP62491 216 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 C9orf66Q5T8R8 295 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 PVRIGQ6DKI7 326 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 UBAC2Q8NBM4 344 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 DCUN1D4Q92564 292 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 OR10C1Q96KK4 312 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 ELOVL1Q9BW60 279 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 GSKIPQ9P0R6 139 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 NBEAL1Q6ZS30 2694 aa9.36□□□□□ -0.91
SF3B3-208ENST00000567250 C7orf66A4D0T2 115 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 PPP5D1E7EU14 171 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 NUPL2O15504 423 aaKnown RBP9.35□□□□□ -0.91
SF3B3-208ENST00000567250 SSSCA1O60232 199 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 GNG7O60262 68 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 IFNA4P05014 189 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 CLEC3BP05452 202 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 INSL3P51460 131 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 ID3Q02535 119 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 RELQ04864 619 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms