RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 EMP1P54849 157 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 HACD4Q5VWC8 232 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 TMEM88Q6PEY1 159 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 ZNF705AQ6ZN79 300 aaPredicted RBP11.91□□□□□ -0.5
CDH3-205ENST00000566808 C10orf67Q8IYJ2 551 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 DCANP1Q8TF63 244 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 ATG101Q9BSB4 218 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 XCL2Q9UBD3 114 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 OR51B2Q9Y5P1 312 aa11.91□□□□□ -0.5
CDH3-205ENST00000566808 VPS13BQ7Z7G8 4022 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 A0A1W2PS18 150 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 HTN3P15516 51 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 ARPC4P59998 168 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 RPS25P62851 125 aaKnown RBP11.9□□□□□ -0.5
CDH3-205ENST00000566808 KCTD21Q4G0X4 260 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 ZNF600Q6ZNG1 722 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 BPIFB6Q8NFQ5 453 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 OR51H1Q8NH63 302 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 NUDCD2Q8WVJ2 157 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 DKK2Q9UBU2 259 aa11.9□□□□□ -0.5
CDH3-205ENST00000566808 PUS1Q9Y606 427 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH3-205ENST00000566808 UBR4Q5T4S7 5183 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 SMIM9A6NGZ8 99 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
CDH3-205ENST00000566808 MT-CO2P00403 227 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 ZNF705DP0CH99 300 aaPredicted RBP11.89□□□□□ -0.51
CDH3-205ENST00000566808 ZNF705BP0CI00 300 aaPredicted RBP11.89□□□□□ -0.51
CDH3-205ENST00000566808 OXA1LQ15070 435 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 CDNFQ49AH0 187 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 FAM222AQ5U5X8 452 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 C8orf59Q8N0T1 100 aaPredicted RBP11.89□□□□□ -0.51
CDH3-205ENST00000566808 RAB40CQ96S21 281 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 RFNGQ9Y644 331 aa11.89□□□□□ -0.51
CDH3-205ENST00000566808 PPYP01298 95 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 P2RY1P47900 373 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 AADACL3Q5VUY0 350 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 CADM3Q8N126 398 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 DHRSXQ8N5I4 330 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 ZNF114Q8NC26 417 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 ZNRF2Q8NHG8 242 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 SLC5A7Q9GZV3 580 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 S100A14Q9HCY8 104 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 PRNDQ9UKY0 176 aa11.88□□□□□ -0.51
CDH3-205ENST00000566808 TMEM235A6NFC5 223 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 HELTA6NFD8 242 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 IFITM5A6NNB3 132 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 SNAPC5O75971 98 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 NPPCP23582 126 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 FCGR2CP31995 323 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 GNG2P59768 71 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 METTL26Q96S19 204 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 FKBP11Q9NYL4 201 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 FAT1Q14517 4588 aa11.87□□□□□ -0.51
CDH3-205ENST00000566808 PDCD5O14737 125 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 GNAO1P09471 354 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 NPBWR1P48145 328 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 EIF2B2P49770 351 aaKnown RBP11.86□□□□□ -0.51
CDH3-205ENST00000566808 OR10A3P58181 314 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 KRTAP10-2P60368 255 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 FABP5Q01469 135 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 PINX1Q96BK5 328 aaKnown RBP11.86□□□□□ -0.51
CDH3-205ENST00000566808 MOB3AQ96BX8 217 aa11.86□□□□□ -0.51
CDH3-205ENST00000566808 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
CDH3-205ENST00000566808 A0A1B0GU03 582 aa11.85□□□□□ -0.51
CDH3-205ENST00000566808 CRYBB3P26998 211 aa11.85□□□□□ -0.51
CDH3-205ENST00000566808 OGFRL1Q5TC84 451 aaPredicted RBP11.85□□□□□ -0.51
CDH3-205ENST00000566808 ZNF818PQ6ZRF7 136 aa11.85□□□□□ -0.51
CDH3-205ENST00000566808 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
CDH3-205ENST00000566808 C18orf15Q96N68 181 aa11.85□□□□□ -0.51
CDH3-205ENST00000566808 CCDC90BQ9GZT6 254 aa11.85□□□□□ -0.51
CDH3-205ENST00000566808 H3BMM0 161 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 SSX5O60225 188 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 KRASP01116 189 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 HSMCR30P0CW71 290 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 FXYD4P59646 89 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 DHRS2Q13268 280 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 Q5VSD8 79 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 ACOT13Q9NPJ3 140 aa11.84□□□□□ -0.51
CDH3-205ENST00000566808 SCGNO76038 276 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 F2RP25116 425 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 GNRHRP30968 328 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 SNRPD3P62318 126 aaKnown RBP11.83□□□□□ -0.52
CDH3-205ENST00000566808 TMEM17Q86X19 198 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 BEST4Q8NFU0 473 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 TSC22D3Q99576 134 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 C8orf4Q9NR00 106 aa11.83□□□□□ -0.52
CDH3-205ENST00000566808 IGHV3OR16-12A0A075B7B8 117 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 TRAV1-2A0A0B4J238 106 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 DBX1A6NMT0 343 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 CASQ2O14958 399 aaPredicted RBP11.82□□□□□ -0.52
CDH3-205ENST00000566808 HLA-DRB4P13762 266 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
CDH3-205ENST00000566808 G6PCP35575 357 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 ALDH3B2P48448 385 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms