RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 DLK1P80370 383 aa14□□□□□ -0.17
HERC2-208ENST00000566635 TMEM182Q6ZP80 229 aaPredicted RBP14□□□□□ -0.17
HERC2-208ENST00000566635 MRPL41Q8IXM3 137 aaKnown RBP14□□□□□ -0.17
HERC2-208ENST00000566635 TAF15Q92804 592 aaKnown RBP eCLIP14□□□□□ -0.17
HERC2-208ENST00000566635 CXorf58Q96LI9 332 aa14□□□□□ -0.17
HERC2-208ENST00000566635 LINC00052Q96N35 136 aa14□□□□□ -0.17
HERC2-208ENST00000566635 A6NDX4 124 aa14□□□□□ -0.17
HERC2-208ENST00000566635 FAM157CP0CG43 387 aa14□□□□□ -0.17
HERC2-208ENST00000566635 BTN1A1Q13410 526 aa14□□□□□ -0.17
HERC2-208ENST00000566635 MLANAQ16655 118 aa14□□□□□ -0.17
HERC2-208ENST00000566635 ZNF114Q8NC26 417 aa14□□□□□ -0.17
HERC2-208ENST00000566635 OR2G3Q8NGZ4 309 aa14□□□□□ -0.17
HERC2-208ENST00000566635 ATP5IP56385 69 aaPredicted RBP13.99□□□□□ -0.17
HERC2-208ENST00000566635 ASPHD1Q5U4P2 390 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 LINC00518Q8N0U6 118 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 GGACTQ9BVM4 153 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 PARD6GQ9BYG4 376 aaPredicted RBP13.99□□□□□ -0.17
HERC2-208ENST00000566635 DMRT1Q9Y5R6 373 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 NOTCH2Q04721 2471 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 AMY1AP04745 511 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 SULT1A2P50226 295 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 SUB1P53999 127 aaKnown RBP eCLIP13.99□□□□□ -0.177e-7■■■□□ 15.5
HERC2-208ENST00000566635 B2MP61769 119 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 TREML4Q6UXN2 200 aa13.99□□□□□ -0.17
HERC2-208ENST00000566635 GNPNAT1Q96EK6 184 aaPredicted RBP13.99□□□□□ -0.17
HERC2-208ENST00000566635 F11RQ9Y624 299 aaKnown RBP13.99□□□□□ -0.17
HERC2-208ENST00000566635 ACANP16112 2415 aa13.98□□□□□ -0.17
HERC2-208ENST00000566635 IGHV4-59P01825 116 aa13.98□□□□□ -0.17
HERC2-208ENST00000566635 MDKP21741 143 aaPredicted RBP13.98□□□□□ -0.17
HERC2-208ENST00000566635 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
HERC2-208ENST00000566635 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
HERC2-208ENST00000566635 RNF141Q8WVD5 230 aa13.98□□□□□ -0.17
HERC2-208ENST00000566635 ZNF48Q96MX3 618 aaPredicted RBP13.98□□□□□ -0.17
HERC2-208ENST00000566635 SRSF8Q9BRL6 282 aaKnown RBP13.98□□□□□ -0.17
HERC2-208ENST00000566635 PARP11Q9NR21 331 aa13.98□□□□□ -0.17
HERC2-208ENST00000566635 WDR83OSQ9Y284 106 aa13.98□□□□□ -0.17
HERC2-208ENST00000566635 TEX46H3BTG2 121 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 FGF16O43320 207 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 EGR2P11161 476 aaPredicted RBP13.97□□□□□ -0.17
HERC2-208ENST00000566635 CD69Q07108 199 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 BTNL8Q6UX41 500 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 EIF4E3Q8N5X7 224 aaKnown RBP13.97□□□□□ -0.17
HERC2-208ENST00000566635 NPCDR1Q9BY65 106 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 FNDC4Q9H6D8 234 aaPredicted RBP13.97□□□□□ -0.17
HERC2-208ENST00000566635 LINC01548A6NM66 108 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
HERC2-208ENST00000566635 CD5LO43866 347 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 IGHV3-48P01763 117 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 OPRK1P41145 380 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 FHITP49789 147 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 AKR1C1Q04828 323 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 SLC16A13Q7RTY0 426 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 LFNGQ8NES3 379 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 OR1P1Q8NH06 330 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 MISP3Q96FF7 219 aa13.97□□□□□ -0.17
HERC2-208ENST00000566635 ATP6V0E1O15342 81 aa13.96□□□□□ -0.17
HERC2-208ENST00000566635 PVRIGQ6DKI7 326 aa13.96□□□□□ -0.17
HERC2-208ENST00000566635 SPNS3Q6ZMD2 512 aa13.96□□□□□ -0.17
HERC2-208ENST00000566635 RNASEH2CQ8TDP1 164 aaKnown RBP13.96□□□□□ -0.17
HERC2-208ENST00000566635 MARC2Q969Z3 335 aa13.96□□□□□ -0.17
HERC2-208ENST00000566635 WNT10AQ9GZT5 417 aa13.96□□□□□ -0.17
HERC2-208ENST00000566635 TNFRSF19Q9NS68 423 aa13.96□□□□□ -0.17
HERC2-208ENST00000566635 ANK3Q12955 4377 aaKnown RBP13.96□□□□□ -0.17
HERC2-208ENST00000566635 PRH1P02810 166 aa13.96□□□□□ -0.18
HERC2-208ENST00000566635 GAMTQ14353 236 aa13.96□□□□□ -0.18
HERC2-208ENST00000566635 OR2T6Q8NHC8 308 aa13.96□□□□□ -0.18
HERC2-208ENST00000566635 MGST2Q99735 147 aa13.96□□□□□ -0.18
HERC2-208ENST00000566635 PSMG3Q9BT73 122 aaPredicted RBP13.96□□□□□ -0.18
HERC2-208ENST00000566635 IGHV3-21A0A0B4J1V1 117 aa13.95□□□□□ -0.18
HERC2-208ENST00000566635 IER3P46695 156 aa13.95□□□□□ -0.18
HERC2-208ENST00000566635 ELLP55199 621 aaPredicted RBP13.95□□□□□ -0.18
HERC2-208ENST00000566635 VSIRQ9H7M9 311 aa13.95□□□□□ -0.18
HERC2-208ENST00000566635 NPVFQ9HCQ7 196 aa13.95□□□□□ -0.18
HERC2-208ENST00000566635 MRPL36Q9P0J6 103 aaKnown RBP13.95□□□□□ -0.18
HERC2-208ENST00000566635 ECSCRQ19T08 205 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 Q6ZRG5 221 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 PITPNC1Q9UKF7 332 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 LSM4Q9Y4Z0 139 aaKnown RBP13.94□□□□□ -0.18
HERC2-208ENST00000566635 DEFA4P12838 97 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
HERC2-208ENST00000566635 C9orf152Q5JTZ5 239 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 ACY3Q96HD9 319 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 YAE1D1Q9NRH1 226 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 TIMM9Q9Y5J7 89 aa13.94□□□□□ -0.18
HERC2-208ENST00000566635 SONP18583 2426 aaKnown RBP13.93□□□□□ -0.18
HERC2-208ENST00000566635 IGKV1OR2-108A0A075B7D4 117 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 NPIPB5A8MRT5 1133 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 FNDC10F2Z333 226 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 CRYGCP07315 174 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 AKR1C8PQ5T2L2 129 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 SGMS2Q8NHU3 365 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 FAM213BQ8TBF2 198 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 SLC35E1Q96K37 410 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 GGTLC1Q9BX51 225 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 CAMLGP49069 296 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 TEPPQ6URK8 271 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 Q6YL49 198 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 CENPVQ7Z7K6 275 aaPredicted RBP13.93□□□□□ -0.18
HERC2-208ENST00000566635 OR5T1Q8NG75 326 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms