RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 AIPO00170 330 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 BET1O15155 118 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 PLA2G10O15496 165 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 PDYNP01213 254 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 IGKV1D-33P01593 117 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 IGKV1-33P01594 117 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 LGALS1P09382 135 aaKnown RBP2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RBP1P09455 135 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 CD7P09564 240 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 TFPTP0C1Z6 253 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 PTHLHP12272 177 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 ATP6V0CP27449 155 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 OPRM1P35372 400 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF140P52738 457 aaPredicted RBP2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 FGF12P61328 243 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RBX1P62877 108 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RNF212Q495C1 297 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 FAM104BQ5XKR9 115 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 AMTNQ6UX39 209 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 Q6ZR03 302 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 EXOC3-AS1Q8N2X6 119 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF283Q8N7M2 679 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 OR13C8Q8NGS7 320 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 OR5J2Q8NH18 312 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RPS4Y2Q8TD47 263 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RTN4IP1Q8WWV3 396 aaPredicted RBP2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 GPR146Q96CH1 333 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 TCEAL4Q96EI5 215 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 DNAJC30Q96LL9 226 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 IGF2BP2-AS1Q96M15 143 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 LYSMD1Q96S90 227 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 B9D2Q9BPU9 175 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 TMEM70Q9BUB7 260 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 CCDC32Q9BV29 185 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 NKX6-2Q9C056 277 aaPredicted RBP2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 OR2D2Q9H210 308 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 PARVBQ9HBI1 364 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 TAAR3PQ9P1P4 343 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RPUSD1Q9UJJ7 312 aaKnown RBP2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 PTPN13Q12923 2485 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 SVILO95425 2214 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 RTL1A6NKG5 1358 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 TJP1Q07157 1748 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 ITGB4P16144 1822 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 MYO5BQ9ULV0 1848 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 SSC5DA1L4H1 1573 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 MYH3P11055 1940 aa2.19□□□□□ -2.06
HERPUD1-211ENST00000566550 PCM1Q15154 2024 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 GCC2Q8IWJ2 1684 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 LMO7Q8WWI1 1683 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 FBN3Q75N90 2809 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 TROQ12816 1431 aaPredicted RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 CHD5Q8TDI0 1954 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 DCHS1Q96JQ0 3298 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 IGLV3-10A0A075B6K4 115 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 PRORSD1PA6NEY8 169 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 DPRXA6NFQ7 191 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 RIIAD1A6NNX1 92 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 C9JCJ5 164 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 M0QZK8 103 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 SLC25A20O43772 301 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 IFNA7P01567 189 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 IGHG2P01859 326 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 SRP19P09132 144 aaKnown RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 LINC00869P0C866 280 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 NPY1RP25929 384 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 CRYBB3P26998 211 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 AKR1C2P52895 323 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 TBPL1P62380 186 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 LTC4SQ16873 150 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 Q6Q795 121 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 TCF24Q7RTU0 167 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 H1FOOQ8IZA3 346 aaPredicted RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF664Q8N3J9 261 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 ZNF561Q8N587 486 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 TMEM105Q8N8V8 129 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 MRPL30Q8TCC3 161 aaKnown RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 RNASE6Q93091 150 aaKnown RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 PFDN5Q99471 154 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 MGLLQ99685 303 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 RNF5Q99942 180 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 PDFQ9HBH1 243 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 TVP23BQ9NYZ1 205 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 SNX12Q9UMY4 172 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 ASB4Q9Y574 426 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 U3KQK5 164 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 MAP1BP46821 2468 aaKnown RBP2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 PLXNB3Q9ULL4 1909 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 NOTCH3Q9UM47 2321 aa2.18□□□□□ -2.06
HERPUD1-211ENST00000566550 IGSF9BQ9UPX0 1349 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 MYO18BQ8IUG5 2567 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 TICRRQ7Z2Z1 1910 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 PINLYPA6NC86 204 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 ARL5CA6NH57 179 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SIGLEC16A6NMB1 481 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 C1orf196B1AJZ1 125 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 H3BMM0 161 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 PANO1I0J062 215 aa2.17□□□□□ -2.06
HERPUD1-211ENST00000566550 SLC17A3O00476 420 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms