RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CORTO00230 105 aa16.15■□□□□ 0.18
SHCBP1-205ENST00000566016 SUB1P53999 127 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHCBP1-205ENST00000566016 EGFEM1PQ0D2K5 195 aa16.15■□□□□ 0.18
SHCBP1-205ENST00000566016 MITD1Q8WV92 249 aa16.15■□□□□ 0.18
SHCBP1-205ENST00000566016 TRAV6A0A075B6T7 132 aa16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 FAM90A26D6RGX4 464 aa16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 GGCTO75223 188 aaKnown RBP16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 RNASE2P10153 161 aaKnown RBP16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 HTR2BP41595 481 aa16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 ACSM6Q6P461 480 aa16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 CLEC19AQ6UXS0 136 aa16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 ENKURQ8TC29 256 aa16.14■□□□□ 0.17
SHCBP1-205ENST00000566016 I3L2K1 104 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 H2AFB2P0C5Z0 115 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 ARL3P36405 182 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 DEFA1P59665 94 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 DEFA3P59666 94 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 TATDN3Q17R31 274 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 GGNBP1Q5YKI7 109 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 DUSP18Q8NEJ0 188 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 OR1S1Q8NH92 325 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 SCARB1Q8WTV0 552 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 C21orf62Q9NYP8 219 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 S4R3C0 116 aa16.13■□□□□ 0.17
SHCBP1-205ENST00000566016 DNAH3Q8TD57 4116 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 CEBPZOSA8MTT3 80 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 PPP5D1E7EU14 171 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 IGHV3-23P01764 117 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 HOXB5P09067 269 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 FCGR2BP31994 310 aaPredicted RBP16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 OR9G4Q8NGQ1 327 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 MISP3Q96FF7 219 aa16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 BSCL2Q96G97 398 aaPredicted RBP16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 HEYLQ9NQ87 328 aaPredicted RBP16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 GAR1Q9NY12 217 aaKnown RBP16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 ZMAT5Q9UDW3 170 aaKnown RBP16.12■□□□□ 0.17
SHCBP1-205ENST00000566016 CLEC3BP05452 202 aa16.11■□□□□ 0.17
SHCBP1-205ENST00000566016 GPR183P32249 361 aa16.11■□□□□ 0.17
SHCBP1-205ENST00000566016 SYNJ2BPP57105 145 aa16.11■□□□□ 0.17
SHCBP1-205ENST00000566016 SPSB3Q6PJ21 355 aa16.11■□□□□ 0.17
SHCBP1-205ENST00000566016 GPHB5Q86YW7 130 aa16.11■□□□□ 0.17
SHCBP1-205ENST00000566016 HIPK2Q9H2X6 1198 aa16.11■□□□□ 0.17
SHCBP1-205ENST00000566016 IFNA21P01568 189 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 C2orf83Q53S99 150 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 SLC24A4Q8NFF2 622 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 DTD1Q8TEA8 209 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 TXN2Q99757 166 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 ELOVL1Q9BW60 279 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 F8W735 103 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 LGALS9O00182 355 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 TGOLN2O43493 480 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 ADAP1O75689 374 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 NXPH3O95157 252 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 MT-CO2P00403 227 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 ATP5IP56385 69 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 DEFA6Q01524 100 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 REC114Q7Z4M0 266 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 NRARPQ7Z6K4 114 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 NOXA1Q86UR1 476 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 OR52B4Q8NGK2 314 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 ZNF431Q8TF32 576 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 SIGLEC8Q9NYZ4 499 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 U3KQ87 197 aa16.1■□□□□ 0.17
SHCBP1-205ENST00000566016 PLET1Q6UQ28 207 aa16.09■□□□□ 0.17
SHCBP1-205ENST00000566016 RBKSQ9H477 322 aa16.09■□□□□ 0.17
SHCBP1-205ENST00000566016 PEMTQ9UBM1 199 aa16.09■□□□□ 0.17
SHCBP1-205ENST00000566016 SAP30O75446 220 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 MED6O75586 246 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 OR2C1O95371 312 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 IL5P05113 134 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 NPY1RP25929 384 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 MFAP4P55083 255 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 RNASEH2CQ8TDP1 164 aaKnown RBP16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 PINX1Q96BK5 328 aaKnown RBP16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 OR4C12Q96R67 309 aa16.08■□□□□ 0.16
SHCBP1-205ENST00000566016 IGHV3-21A0A0B4J1V1 117 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 OR2T8A6NH00 312 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 A8MWP6 167 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 LY86O95711 162 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 FAM106AQ4KMX7 169 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 IL34Q6ZMJ4 242 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 CIB3Q96Q77 187 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 SEC22CQ9BRL7 303 aa16.07■□□□□ 0.16
SHCBP1-205ENST00000566016 MPTX1A8MV57 137 aa16.06■□□□□ 0.16
SHCBP1-205ENST00000566016 Q56UQ5 140 aa16.06■□□□□ 0.16
SHCBP1-205ENST00000566016 TMEM170AQ8WVE7 144 aa16.06■□□□□ 0.16
SHCBP1-205ENST00000566016 ZNF436Q9C0F3 470 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-205ENST00000566016 RPS10-NUDT3A0A1W2PQS6 291 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 ADMP35318 185 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 OPRK1P41145 380 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 NPBWR1P48145 328 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 KRTAP10-11P60412 298 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 UBAC2Q8NBM4 344 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 OR4D5Q8NGN0 318 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 MARVELD1Q9BSK0 173 aa16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 FNDC4Q9H6D8 234 aaPredicted RBP16.05■□□□□ 0.16
SHCBP1-205ENST00000566016 NUPL2O15504 423 aaKnown RBP16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 SYNGR2O43760 224 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 PRAF2O60831 178 aa16.04■□□□□ 0.16
SHCBP1-205ENST00000566016 IFNA10P01566 189 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms