RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 ZFAND3Q9H8U3 227 aa5.88□□□□□ -1.47
SMPD3-206ENST00000566009 FGF20Q9NP95 211 aaPredicted RBP5.88□□□□□ -1.47
SMPD3-206ENST00000566009 ERVK13-1Q9NX77 482 aa5.88□□□□□ -1.47
SMPD3-206ENST00000566009 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.87□□□□□ -1.47
SMPD3-206ENST00000566009 TRBV6-6A0A0A6YYG2 114 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 A0A0J9YXV3 536 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 FAM90A26D6RGX4 464 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 SERPINE2P07093 398 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 CD3GP09693 182 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 OR13C7P0DN81 318 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 EVI2AP22794 236 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 DCKP27707 260 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 WFDC2Q14508 124 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 OR2B11Q5JQS5 317 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 DHRSXQ8N5I4 330 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 OR10J6PQ8NGY7 276 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 APH1BQ8WW43 257 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 PPP1R14BQ96C90 147 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 GPHA2Q96T91 129 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 PDCD1LG2Q9BQ51 273 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 LINC00467Q9BRT7 94 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 C8orf4Q9NR00 106 aa5.87□□□□□ -1.47
SMPD3-206ENST00000566009 IRGMA1A4Y4 181 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 TMEM212A6NML5 194 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 E9PI62 339 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 WBP4O75554 376 aaKnown RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 FCER2P06734 321 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 LIMS3P0CW19 117 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 LIMS4P0CW20 117 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 NKX2-1P43699 371 aaPredicted RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 GTF2A1P52655 376 aaPredicted RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 MFAP4P55083 255 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 PPP3R1P63098 170 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 PSG9Q00887 426 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 WT1-ASQ06250 92 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 UNC119Q13432 240 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 SMN1Q16637 294 aaKnown RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 CCDC58Q4VC31 144 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 IGSF11Q5DX21 431 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 RPL22L1Q6P5R6 122 aaKnown RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 TMPRSS11AQ6ZMR5 421 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 PACRGLQ8N7B6 248 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 HSD17B11Q8NBQ5 300 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 CYGBQ8WWM9 190 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 VSIG2Q96IQ7 327 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 HDHD3Q9BSH5 251 aaPredicted RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 BABAM2Q9NXR7 383 aa5.86□□□□□ -1.47
SMPD3-206ENST00000566009 RBM7Q9Y580 266 aaKnown RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 F11RQ9Y624 299 aaKnown RBP5.86□□□□□ -1.47
SMPD3-206ENST00000566009 MFNGO00587 321 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 OGG1O15527 345 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 EIF2B2P49770 351 aaKnown RBP5.85□□□□□ -1.47
SMPD3-206ENST00000566009 ETV1P50549 477 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 PAX9P55771 341 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 MRPS15P82914 257 aaKnown RBP5.85□□□□□ -1.47
SMPD3-206ENST00000566009 AWAT2Q6E213 333 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 OR13F1Q8NGS4 319 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 GPR148Q8TDV2 347 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 ORAI1Q96D31 301 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 TMEM80Q96HE8 168 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 IGF2BP2-AS1Q96M15 143 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 TXN2Q99757 166 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 SAV1Q9H4B6 383 aaPredicted RBP5.85□□□□□ -1.47
SMPD3-206ENST00000566009 CLEC2DQ9UHP7 191 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 MGAT4AQ9UM21 535 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 MRPS7Q9Y2R9 242 aaKnown RBP5.85□□□□□ -1.47
SMPD3-206ENST00000566009 PRELID3BQ9Y3B1 194 aa5.85□□□□□ -1.47
SMPD3-206ENST00000566009 TIMM8BQ9Y5J9 83 aaPredicted RBP5.85□□□□□ -1.47
SMPD3-206ENST00000566009 TRAV5A0A0B4J249 113 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 A0A1B0GU03 582 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 J3QRK9 145 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 GNG7O60262 68 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 CD2P06729 351 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 CRYGDP07320 174 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 MYL12AP19105 171 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 CELP19835 753 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 CRYBB3P26998 211 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 SERPINB10P48595 397 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 AP2S1P53680 142 aaPredicted RBP5.84□□□□□ -1.47
SMPD3-206ENST00000566009 RPL30P62888 115 aaKnown RBP5.84□□□□□ -1.47
SMPD3-206ENST00000566009 ST3GAL4Q11206 333 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 ZNF79Q15937 498 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 LYPD5Q6UWN5 251 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 ZNF600Q6ZNG1 722 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 KCTD9Q7L273 389 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 ABHD1Q96SE0 405 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 QTRT1Q9BXR0 403 aaKnown RBP5.84□□□□□ -1.47
SMPD3-206ENST00000566009 COMMD5Q9GZQ3 224 aa5.84□□□□□ -1.47
SMPD3-206ENST00000566009 NOP10Q9NPE3 64 aaKnown RBP5.84□□□□□ -1.47
SMPD3-206ENST00000566009 DIMT1Q9UNQ2 313 aaKnown RBP5.84□□□□□ -1.47
SMPD3-206ENST00000566009 EFCAB10A6NFE3 127 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 XAF1Q6GPH4 301 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 FOXI2Q6ZQN5 318 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 WFDC10BQ8IUB3 73 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 C8orf59Q8N0T1 100 aaPredicted RBP5.83□□□□□ -1.48
SMPD3-206ENST00000566009 JAGN1Q8N5M9 183 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 MOB3AQ96BX8 217 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 METTL26Q96S19 204 aa5.83□□□□□ -1.48
SMPD3-206ENST00000566009 HINT2Q9BX68 163 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms