RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NPFFR1Q9GZQ6 430 aa10□□□□□ -0.81
SF3B3-206ENST00000565990 SAV1Q9H4B6 383 aaPredicted RBP10□□□□□ -0.81
SF3B3-206ENST00000565990 SIGLEC9Q9Y336 463 aa10□□□□□ -0.81
SF3B3-206ENST00000565990 TNCP24821 2201 aa10□□□□□ -0.81
SF3B3-206ENST00000565990 FAM24AA6NFZ4 105 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 ZNF98A6NK75 572 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 FCN1O00602 326 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 IFNA5P01569 189 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 SULT1A1P50225 295 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 RIPPLY3P57055 190 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 POLR2GP62487 172 aaKnown RBP eCLIP9.99□□□□□ -0.81
SF3B3-206ENST00000565990 SERF2P84101 59 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 MMDQ15546 238 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 C5orf64Q2M2E5 130 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 SOHLH1Q5JUK2 328 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 AKR1C8PQ5T2L2 129 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 Q6ZS46 218 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 FAM213BQ8TBF2 198 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 SFT2D1Q8WV19 159 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 RHOVQ96L33 236 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 HARBI1Q96MB7 349 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 PRSS22Q9GZN4 317 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 RPS10P5Q9NQ39 176 aa9.99□□□□□ -0.81
SF3B3-206ENST00000565990 METTL1Q9UBP6 276 aaKnown RBP9.99□□□□□ -0.81
SF3B3-206ENST00000565990 TMEM89A2RUT3 159 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 RBFOX3A6NFN3 312 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 C9JQL5 133 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 UBE2CO00762 179 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 SLC25A17O43808 307 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 SOX15O60248 233 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 S1PR2O95136 353 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 IGHG2P01859 326 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 SERPINE2P07093 398 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 NQO2P16083 231 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 HBG1P69891 147 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 HBG2P69892 147 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 ZNF562Q6V9R5 426 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 TMEM182Q6ZP80 229 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-206ENST00000565990 SLC35E3Q7Z769 313 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 PPP1R27Q86WC6 154 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 HSD17B11Q8NBQ5 300 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 VSTM2AQ8TAG5 236 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 PINX1Q96BK5 328 aaKnown RBP9.98□□□□□ -0.81
SF3B3-206ENST00000565990 BSCL2Q96G97 398 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-206ENST00000565990 P2RX4Q99571 388 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 RASL11BQ9BPW5 248 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 FBXL15Q9H469 300 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 ZNF702PQ9H963 129 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 BET1LQ9NYM9 111 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 TIMM9Q9Y5J7 89 aa9.98□□□□□ -0.81
SF3B3-206ENST00000565990 LINC01548A6NM66 108 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 AGPAT2O15120 278 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 SSSCA1O60232 199 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 IFNA17P01571 189 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 HLA-DRB1P01911 266 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 P0C879 139 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 SSBP2P81877 361 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-206ENST00000565990 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-206ENST00000565990 PRSS8Q16651 343 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 ATP6V1FQ16864 119 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 KRTAP24-1Q3LI83 254 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 SPSB3Q6PJ21 355 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 OR5C1Q8NGR4 320 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 TMEM167AQ8TBQ9 72 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
SF3B3-206ENST00000565990 ATRQ13535 2644 aa9.96□□□□□ -0.81
SF3B3-206ENST00000565990 TET2Q6N021 2002 aaPredicted RBP9.96□□□□□ -0.81
SF3B3-206ENST00000565990 IGHV7-81A0A0B4J1V7 117 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 MARCH11A6NNE9 402 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 M0R036 132 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 UPK2O00526 184 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 KBTBD11O94819 623 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 KRASP01116 189 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 IGF1P05019 195 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 S100A6P06703 90 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 SAA1P0DJI8 122 aaPredicted RBP9.96□□□□□ -0.82
SF3B3-206ENST00000565990 MEOX2P50222 304 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 PAX9P55771 341 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 OR4A47Q6IF82 309 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.96□□□□□ -0.82
SF3B3-206ENST00000565990 LINC01006Q8NI28 216 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 TAF15Q92804 592 aaKnown RBP eCLIP9.96□□□□□ -0.82
SF3B3-206ENST00000565990 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 R3HDM4Q96D70 268 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 SERTAD4Q9NUC0 356 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM242Q9NWH2 141 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 ZNF580Q9UK33 172 aa9.96□□□□□ -0.82
SF3B3-206ENST00000565990 A0A1B0GUS0 222 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 SH2D7A6NKC9 451 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 SYNGR2O43760 224 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 IFNA1P01562 189 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 IGKV1-5P01602 117 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms