RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.04■□□□□ -0
CMTM3-211ENST00000565922 TMEM56-RWDD3S4R434 201 aa15.04■□□□□ -0
CMTM3-211ENST00000565922 IGHV3-21A0A0B4J1V1 117 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 A8MZ25 164 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 NDUFA4O00483 81 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 NUPL2O15504 423 aaKnown RBP15.03■□□□□ -0
CMTM3-211ENST00000565922 FRMD6-AS1P0C7T7 363 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 MFAP4P55083 255 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 Q8N1Y9 231 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 LHFPL5Q8TAF8 219 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 TMEM190Q8WZ59 177 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 MRPL27Q9P0M9 148 aaKnown RBP15.03■□□□□ -0
CMTM3-211ENST00000565922 DNAH9Q9NYC9 4486 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 COL7A1Q02388 2944 aa15.03■□□□□ -0
CMTM3-211ENST00000565922 A0A0G2JRQ6 117 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 IZUMO1RA6ND01 250 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 MT-CO2P00403 227 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 IGHV4-30-4P0DP06 118 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 AKR1C4P17516 323 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 INPP1P49441 399 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 SPCS3P61009 180 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 RELQ04864 619 aaPredicted RBP15.02■□□□□ -0
CMTM3-211ENST00000565922 AARDQ4LEZ3 155 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 SPINK9Q5DT21 86 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 ZNF57Q68EA5 555 aaPredicted RBP15.02■□□□□ -0
CMTM3-211ENST00000565922 UNQ9165/PRO28630Q6UXU0 137 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 UXS1Q8NBZ7 420 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 TMEM230Q96A57 120 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 PINX1Q96BK5 328 aaKnown RBP15.02■□□□□ -0
CMTM3-211ENST00000565922 SLC25A21Q9BQT8 299 aaPredicted RBP15.02■□□□□ -0
CMTM3-211ENST00000565922 U3KQK5 164 aa15.02■□□□□ -0
CMTM3-211ENST00000565922 IGHV3-35A0A0C4DH35 117 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 I3L2K1 104 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 TMEM187Q14656 261 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 CACNG8Q8WXS5 425 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 ASCL2Q99929 193 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 SRRQ9GZT4 340 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 DAZ1Q9NQZ3 744 aaKnown RBP15.01□□□□□ -0.01
CMTM3-211ENST00000565922 CACNG5Q9UF02 275 aa15.01□□□□□ -0.01
CMTM3-211ENST00000565922 F8W735 103 aaPredicted RBP15□□□□□ -0.01
CMTM3-211ENST00000565922 GNG7O60262 68 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 C8orf88P0DMB2 117 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 CD81P60033 236 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 GUCA2BQ16661 112 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 TM4SF20Q53R12 229 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 TMEM128Q5BJH2 165 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 TRIQKQ629K1 86 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 LGI3Q8N145 548 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 DUSP18Q8NEJ0 188 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 CHRDL1Q9BU40 450 aa15□□□□□ -0.01
CMTM3-211ENST00000565922 TRAV25A0A0B4J276 109 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 A0A0B4J2A0 478 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 SCGB2A1O75556 95 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 SULT1A3P0DMM9 295 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 SULT1A4P0DMN0 295 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 EDN2P20800 178 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 NPBWR1P48145 328 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 ANKRD55Q3KP44 614 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 Q6ZRM9 215 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 TMED4Q7Z7H5 227 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 GPR146Q96CH1 333 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 WWC2-AS2Q96NR7 200 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 TUBA4BQ9H853 241 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 ZMAT4Q9H898 229 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 C19orf73Q9NVV2 129 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 MLXQ9UH92 298 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 SHPKQ9UHJ6 478 aa14.99□□□□□ -0.01
CMTM3-211ENST00000565922 DUXBA0A1W2PPF3 345 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 C15orf62A8K5M9 175 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 K7EMT4 169 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 CTSGP08311 255 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 RNASE2P10153 161 aaKnown RBP14.98□□□□□ -0.01
CMTM3-211ENST00000565922 ADMP35318 185 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 HTR2BP41595 481 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 SUPT4H1P63272 117 aaKnown RBP14.98□□□□□ -0.01
CMTM3-211ENST00000565922 PVRIGQ6DKI7 326 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 BTNL8Q6UX41 500 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 RBPMS2Q6ZRY4 209 aaKnown RBP14.98□□□□□ -0.01
CMTM3-211ENST00000565922 SLC16A13Q7RTY0 426 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 SBSPONQ8IVN8 264 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 NEURL2Q9BR09 285 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 C20orf24Q9BUV8 137 aa14.98□□□□□ -0.01
CMTM3-211ENST00000565922 NAP1L6A6NFF2 107 aa14.97□□□□□ -0.01
CMTM3-211ENST00000565922 ZNF785A8K8V0 405 aa14.97□□□□□ -0.01
CMTM3-211ENST00000565922 CEBPZOSA8MTT3 80 aa14.97□□□□□ -0.01
CMTM3-211ENST00000565922 CCR6P51684 374 aa14.97□□□□□ -0.01
CMTM3-211ENST00000565922 RBMS2Q15434 407 aaKnown RBP14.97□□□□□ -0.01
CMTM3-211ENST00000565922 TMEM61Q8N0U2 210 aa14.97□□□□□ -0.01
CMTM3-211ENST00000565922 WDR89Q96FK6 387 aaPredicted RBP14.97□□□□□ -0.01
CMTM3-211ENST00000565922 HIPK2Q9H2X6 1198 aa14.97□□□□□ -0.01
CMTM3-211ENST00000565922 HEYLQ9NQ87 328 aaPredicted RBP14.97□□□□□ -0.01
CMTM3-211ENST00000565922 RPS10-NUDT3A0A1W2PQS6 291 aa14.96□□□□□ -0.01
CMTM3-211ENST00000565922 OPRK1P41145 380 aa14.96□□□□□ -0.01
CMTM3-211ENST00000565922 BSXQ3C1V8 233 aa14.96□□□□□ -0.01
CMTM3-211ENST00000565922 LAMTOR1Q6IAA8 161 aa14.96□□□□□ -0.01
CMTM3-211ENST00000565922 NOXA1Q86UR1 476 aa14.96□□□□□ -0.01
CMTM3-211ENST00000565922 VAMP1P23763 118 aa14.95□□□□□ -0.02
CMTM3-211ENST00000565922 SMCO1Q147U7 214 aa14.95□□□□□ -0.02
CMTM3-211ENST00000565922 NMSQ5H8A3 153 aa14.95□□□□□ -0.02
CMTM3-211ENST00000565922 CENPSQ8N2Z9 138 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms