RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 RPP30P78346 268 aaKnown RBP9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 FAM106AQ4KMX7 169 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 PLET1Q6UQ28 207 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 GPHB5Q86YW7 130 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 DCUN1D4Q92564 292 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 DLX4Q92988 240 aaPredicted RBP9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 CIB3Q96Q77 187 aaPredicted RBP9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 GPN1Q9HCN4 374 aaPredicted RBP9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 NBEAL1Q6ZS30 2694 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 PRAF2O60831 178 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 IGLL1P15814 213 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 FCGR2BP31994 310 aaPredicted RBP9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 ARL3P36405 182 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 IFITM3Q01628 133 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 C2orf83Q53S99 150 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 GGNBP1Q5YKI7 109 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 CLEC19AQ6UXS0 136 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 ZNF502Q8TBZ5 544 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 ZNF431Q8TF32 576 aaPredicted RBP9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 SCARB1Q8WTV0 552 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 BSCL2Q96G97 398 aaPredicted RBP9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 C21orf62Q9NYP8 219 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 PEMTQ9UBM1 199 aa9.68□□□□□ -0.86
SHCBP1-204ENST00000565887 FBN3Q75N90 2809 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 RPS10-NUDT3A0A1W2PQS6 291 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 SEC14L6B5MCN3 397 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 LGALS9O00182 355 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 RNASE2P10153 161 aaKnown RBP9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 NPBWR1P48145 328 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 SLURP1P55000 103 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 MFAP2P55001 183 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 BSXQ3C1V8 233 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 ETFRF1Q6IPR1 90 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 ACSM6Q6P461 480 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 C19orf35Q6ZS72 473 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 C1QL4Q86Z23 238 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 RNASEH2CQ8TDP1 164 aaKnown RBP9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 DTD1Q8TEA8 209 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 OR4C12Q96R67 309 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 PALMDQ9NP74 551 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
SHCBP1-204ENST00000565887 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 G3V4G9 280 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 I3L2K1 104 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 K7EIM0 57 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 BMPR1BO00238 502 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 MT-CO2P00403 227 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 IFNA10P01566 189 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 DCTN2Q13561 401 aaKnown RBP9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 NRARPQ7Z6K4 114 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 C12orf45Q8N5I9 185 aaPredicted RBP9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 SLC24A4Q8NFF2 622 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 MARVELD1Q9BSK0 173 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 RBKSQ9H477 322 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
SHCBP1-204ENST00000565887 TRAV30A0A087WSZ9 112 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 SNRPGP15A8MWD9 76 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 INMT-MINDY4F8WBC2 141 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 SYNGR2O43760 224 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 SLC25A4P12235 298 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 NPY1RP25929 384 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 SYNJ2BPP57105 145 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 RAB11AP62491 216 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 DEFA5Q01523 94 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 ID3Q02535 119 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 RELQ04864 619 aaPredicted RBP9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 BEAN1Q3B7T3 259 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 Q56UQ5 140 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 OR9G4Q8NGQ1 327 aa9.65□□□□□ -0.86
SHCBP1-204ENST00000565887 PPP5D1E7EU14 171 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 WRBO00258 174 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 TGOLN2O43493 480 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 ADAP1O75689 374 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 OR2C1O95371 312 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 IGHV3-23P01764 117 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 GPR183P32249 361 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 GPX4P36969 197 aaPredicted RBP9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 OPRK1P41145 380 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 NKX2-1P43699 371 aaPredicted RBP9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 ELLP55199 621 aaPredicted RBP9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 IAH1Q2TAA2 248 aaPredicted RBP9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 UXS1Q8NBZ7 420 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 OR52B4Q8NGK2 314 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 CACNG8Q8WXS5 425 aa9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 PINX1Q96BK5 328 aaKnown RBP9.64□□□□□ -0.87
SHCBP1-204ENST00000565887 OR2T8A6NH00 312 aa9.63□□□□□ -0.87
SHCBP1-204ENST00000565887 GNG7O60262 68 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms