RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ALKBH6Q3KRA9 238 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 IBA57Q5T440 356 aaKnown RBP13.4□□□□□ -0.26
LINC00554-201ENST00000564841 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
LINC00554-201ENST00000564841 CADP27708 2225 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 NPIPB11E5RHQ5 1161 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 PSPNO60542 156 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 AESQ08117 197 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 FDCSPQ8NFU4 85 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 OR52E5Q8NH55 327 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 TMEM45BQ96B21 275 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 TNCP24821 2201 aa13.4□□□□□ -0.27
LINC00554-201ENST00000564841 C9JCJ5 164 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 C12orf77C9JDV5 145 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 CORTO00230 105 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 HLA-DQA1P01909 254 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 CD46P15529 392 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 TCTAP57738 103 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 ZNF766Q5HY98 468 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 MOB3BQ86TA1 216 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 DEFB125Q8N687 156 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 URB1-AS1Q96HZ7 61 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 ZNF430Q9H8G1 570 aaPredicted RBP13.39□□□□□ -0.27
LINC00554-201ENST00000564841 ZNF331Q9NQX6 463 aaPredicted RBP13.39□□□□□ -0.27
LINC00554-201ENST00000564841 IGF2RP11717 2491 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 TET2Q6N021 2002 aaPredicted RBP13.39□□□□□ -0.27
LINC00554-201ENST00000564841 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 LINC00869P0C866 280 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 DEFB109BQ30KR1 87 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 WDR86Q86TI4 376 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 FNDC4Q9H6D8 234 aaPredicted RBP13.39□□□□□ -0.27
LINC00554-201ENST00000564841 KLRC4-KLRK1H3BQV0 150 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 CDIPTO14735 213 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 RAC2P15153 192 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 PPOXP50336 477 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 GABRA6Q16445 453 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 TMEM249Q2WGJ8 235 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 FAM214BQ7L5A3 538 aa13.39□□□□□ -0.27
LINC00554-201ENST00000564841 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 K7ERU9 68 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 REG1AP05451 166 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 GRPP07492 148 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 DCTN5Q9BTE1 182 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 M0R1X1 148 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 MYOD1P15172 320 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 UQCRFS1P47985 274 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 TIGITQ495A1 244 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 LHFPL4Q7Z7J7 247 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 SCCPDHQ8NBX0 429 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 SGK494Q96LW2 274 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 FZR1Q9UM11 496 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 PSG11Q9UQ72 335 aa13.38□□□□□ -0.27
LINC00554-201ENST00000564841 IGFBP2P18065 325 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 C11orf52Q96A22 123 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 KLF13Q9Y2Y9 288 aaPredicted RBP13.37□□□□□ -0.27
LINC00554-201ENST00000564841 GGTLC3B5MD39 225 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 FCGR3BO75015 233 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 ZNF138P52744 262 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 GNG3P63215 75 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 Q5PR19 223 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 ANKRD30BLA7E2S9 258 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 PPIAL4DF5H284 164 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 WNT9BO14905 357 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 HBZP02008 142 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
LINC00554-201ENST00000564841 Q8TCH9 128 aa13.37□□□□□ -0.27
LINC00554-201ENST00000564841 HSD17B10Q99714 261 aaKnown RBP13.37□□□□□ -0.27
LINC00554-201ENST00000564841 ARFGEF3Q5TH69 2177 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 TCF15Q12870 199 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 TRAT1Q6PIZ9 186 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 PIP4P1Q86T03 277 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 GALMQ96C23 342 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 TXNDC17Q9BRA2 123 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 TMEM70Q9BUB7 260 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 CHODLQ9H9P2 273 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 CHTOPQ9Y3Y2 248 aaKnown RBP13.36□□□□□ -0.27
LINC00554-201ENST00000564841 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 VWC2LB2RUY7 222 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 CATR1Q13166 79 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 ZNF826PQ6ZT77 177 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
LINC00554-201ENST00000564841 OR7C2O60412 319 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 CIDEAO60543 219 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 TOX4O94842 621 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 PRAMEF5Q5TYX0 476 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 PRAMEF6Q5VXH4 476 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 Q6ZR03 302 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 CLUHP3Q96NS8 147 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 MBNL3Q9NUK0 354 aaKnown RBP13.35□□□□□ -0.27
LINC00554-201ENST00000564841 INTS1Q8N201 2190 aaKnown RBP13.35□□□□□ -0.27
LINC00554-201ENST00000564841 TRGV5A0A0B4J1U4 118 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 FAM120AOSQ5T036 256 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 SLC25A34Q6PIV7 304 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 OR1B1Q8NGR6 318 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 CHRDL1Q9BU40 450 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 SPRR3Q9UBC9 169 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 POLEQ07864 2286 aa13.35□□□□□ -0.27
LINC00554-201ENST00000564841 PRSS46E5RG02 174 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms